myRT

myRT report for GCA_001812645.1_ASM181264v1

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Seq: KV809933.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold427, whole genome shotgun sequence (11323 bp)
Overview 1 RT 1: 2120-6721 bp Neighborhood of RT #1 [2120, 6729] HTH_XRE DUF3841 RVT-AbiP2 AlbA_2 PRK09290 Feature: gene Location: 2120-2365 bp Ori: OFR78882.1 Feature: domain Description: HTH_XRE Location: 2171-2357 bp Feature: domain Description: HTH_XRE Location: 21 71 -2357 bp Feature: gene Location: 2741-3220 bp Ori: OFR78883.1 Feature: domain Description: DUF3841 Location: 2750-3125 bp Feature: domain Description: DUF3841 Location: 2750-31 25 bp Feature: gene Location: 3398-4894 bp Ori: OFR78890.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3806-4262 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3806-4262 bp Feature: gene Location: 5040-5354 bp Ori: OFR78884.1 Feature: domain Description: AlbA_2 Location: 5079-5250 bp Feature: domain Description: AlbA_2 Location: 5079-5250 bp Feature: gene Location: 5470-6729 bp Ori: OFR78885.1 Feature: domain Description: PRK09290 Location: 5476-6721 bp Feature: domain Description: PRK09290 Location: 5476-6721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), DUF3841 (pfam12952), RVT-AbiP2, AlbA_2 (pfam04326), PRK09290 (allantoate amidohydrolase; Reviewed)

Seq: KV810003.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold728, whole genome shotgun sequence (86623 bp)
Overview 1 RT 1: 65313-72144 bp Neighborhood of RT #1 [65313, 72152] PRK13354 CE4_DAC_u3_5s RVT-GII GIIM AcrR CcmA Feature: gene Location: 65313-66569 bp Ori: OFR76238.1 Feature: domain Description: PRK13354 Location: 65316-66561 bp Feature: domain Description: PRK13354 Location: 65316-66561 bp Feature: gene Location: 67149-68450 bp Ori: OFR76239.1 Feature: domain Description: CE4_DAC_u3_5s Location: 67818-68208 bp Feature: domain Description: CE4_DAC_u3_5s Location: 67818-682 08 bp Feature: gene Location: 68543-69931 bp Ori: OFR76240.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68864-69479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68864-69479 bp Feature: domain Description: GIIM Note: maturase Location: 69536-69752 bp Feature: domain Description: GIIM Note: maturase Location: 69536-69752 bp Feature: gene Location: 70418-71017 bp Ori: OFR76241.1 Feature: domain Description: AcrR Location: 70436-70922 bp Feature: domain Description: AcrR Location: 70436-7092 2 bp Feature: gene Location: 71271-72152 bp Ori: OFR76242.1 Feature: domain Description: CcmA Location: 71274-72144 bp Feature: domain Description: CcmA Location: 712 74-72 144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13354 (tyrosyl-tRNA synthetase; Provisional), CE4_DAC_u3_5s (cd10972), RVT-GII, GIIM (pfam08388), AcrR (COG1309), CcmA (COG4133)

Seq: KV809839.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold160, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 721-2512 bp Neighborhood of RT #1 [721, 2631] RVT-GII HNHc Feature: gene Location: 721-2631 bp Ori: OFR83538.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 23 47-2512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV810014.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold777, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 115-1114 bp Neighborhood of RT #1 [115, 1941] RVT-GII Feature: gene Location: 115-1941 bp Ori: OFR75391.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 415-1114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 15-1114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV809790.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold79, whole genome shotgun sequence (2714 bp)
Overview 1 RT 1: 384-2476 bp Neighborhood of RT #1 [384, 2592] RVT-GII HNHc Feature: gene Location: 384-614 bp Feature: gene Location: 733-2592 bp Ori: OFR75360.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042-1783 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Feature: domain Description: HNHc Note: nucleases Location: 2338-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV809840.1 Enterococcus sp. HMSC072F07 genomic scaffold Scaffold162, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 1-2542 bp Neighborhood of RT #1 [1, 3204] HsdM RVT-AbiP2 Feature: gene Location: 1-1478 bp Ori: OFR83536.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: gene Location: 1816-3204 bp Ori: OFR83537.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2