myRT

myRT report for GCA_001814315.1_ASM181431v1

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Seq: KV815905.1 Enterococcus sp. HMSC063C12 genomic scaffold Scaffold717, whole genome shotgun sequence (8792 bp)
Overview 1 RT 1: 3246-8760 bp Neighborhood of RT #1 [3246, 8774] TcpE RVT-GII AAA_10 Feature: gene Location: 3246-3635 bp Ori: OFP93803.1 Feature: domain Description: TcpE Location: 3264-3564 bp Feature: domain Description: TcpE Location: 3264-3564 bp Feature: gene Location: 3819-5296 bp Feature: gene Location: 5996-7822 bp Ori: OFP93759.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6296-6995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6296-6995 bp Feature: gene Location: 7935-8774 bp Feature: domain Description: AAA_10 Location: 7941-8760 bp Feature: domain Description: AAA_1 0 Location: 7941 -8760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), RVT-GII, AAA_10 (pfam12846)

Seq: KV815931.1 Enterococcus sp. HMSC063C12 genomic scaffold Scaffold957, whole genome shotgun sequence (26721 bp)
Overview 1 RT 1: 19116-24783 bp Neighborhood of RT #1 [19116, 24809] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 19116-19460 bp Ori: OFP91592.1 Feature: domain Description: RelB_DinJ Location: 19326-19452 bp Feature: domain Description: RelB_DinJ Location: 1932 6-19452 bp Feature: gene Location: 19529-20512 bp Feature: domain Description: FtsK_SpoIIIE Location: 20186-20426 bp Feature: domain Description: FtsK_SpoIIIE Location: 2 0186-2 042 6 bp Feature: gene Location: 21211-23013 bp Ori: OFP91593.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21505-22201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1505-2 2 2 01 bp Feature: domain Description: HNHc Note: nucleases Location: 22741-22900 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 741-2 2 900 bp Feature: gene Location: 23115-23412 bp Feature: domain Description: FtsK Location: 23127-23367 bp Feature: domain Description: FtsK Location: 2 312 7-2 3367 bp Feature: gene Location: 23667-24809 bp Ori: OFP91569.1 Feature: domain Description: Dcm Location: 23670-24783 bp Feature: domain Description: Dcm Location: 2 3670-2 4783 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: KV815722.1 Enterococcus sp. HMSC063C12 genomic scaffold Scaffold80, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 84-3256 bp Neighborhood of RT #1 [84, 3287] RVT-AbiP2 HsdM Feature: gene Location: 84-1472 bp Ori: OFP93147.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 345-810 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3 45-810 bp Feature: gene Location: 1810-3287 bp Ori: OFP93146.1 Feature: domain Description: HsdM Location: 1831-3256 bp Feature: domain Description: HsdM Location: 183 1-3 256 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)