myRT

myRT report for GCA_001815025.1_ASM181502v1

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Seq: KV818797.1 Enterococcus sp. HMSC066C04 genomic scaffold Scaffold254, whole genome shotgun sequence (11205 bp)
Overview 1 RT 1: 1537-9095 bp Neighborhood of RT #1 [1537, 9095] TcpE RVT-GII HNHc AAA_10 Feature: gene Location: 1537-1926 bp Ori: OFP15346.1 Feature: domain Description: TcpE Location: 1555-1855 bp Feature: domain Description: TcpE Location: 1 555-1 855 bp Feature: gene Location: 1913-3157 bp Feature: gene Location: 3850-5647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4147-4846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 47-4846 bp Feature: domain Description: HNHc Note: nucleases Location: 5401-5539 bp Feature: domain Description: HNHc Note: nucleases Location: 5401 -5539 bp Feature: gene Location: 5726-6967 bp Feature: domain Description: AAA_10 Location: 5849-6932 bp Feature: domain Description: AAA_1 0 Location: 5849-6932 bp Feature: gene Location: 6972-9095 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), RVT-GII, HNHc (smart00507), AAA_10 (pfam12846)

Seq: KV818724.1 Enterococcus sp. HMSC066C04 genomic scaffold Scaffold42, whole genome shotgun sequence (10084 bp)
Overview 1 RT 1: 2391-7949 bp Neighborhood of RT #1 [2391, 7957] Dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 2391-3533 bp Ori: OFP11409.1 Feature: domain Description: Dcm Location: 2394-3507 bp Feature: domain Description: Dcm Location: 2 394-3507 bp Feature: gene Location: 3578-3958 bp Ori: OFP11410.1 Feature: domain Description: FtsK Location: 3593-3833 bp Feature: domain Description: FtsK Location: 3593-3833 bp Feature: gene Location: 4060-5862 bp Ori: OFP11413.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4354-5050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4354-5050 bp Feature: domain Description: HNHc Note: nucleases Location: 5590-5749 bp Feature: domain Description: HNHc Note: nucleases Location: 5590-5749 bp Feature: gene Location: 6561-7544 bp Feature: domain Description: FtsK_SpoIIIE Location: 7218-7458 bp Feature: domain Description: FtsK_SpoIIIE Location: 72 18-7458 bp Feature: gene Location: 7613-7957 bp Ori: OFP11414.1 Feature: domain Description: RelB_DinJ Location: 7823-7949 bp Feature: domain Description: RelB_DinJ Location: 782 3-7949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dcm (COG0270), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: KV818700.1 Enterococcus sp. HMSC066C04 genomic scaffold Scaffold13, whole genome shotgun sequence (12056 bp)
Overview 1 RT 1: 6629-12024 bp Neighborhood of RT #1 [6629, 12053] PinE Tra8 RVT-AbiP2 HsdM Feature: gene Location: 6629-7192 bp Ori: OFP18000.1 Feature: domain Description: PinE Location: 6641-7187 bp Feature: domain Description: PinE Location: 6641-7187 bp Feature: gene Location: 7835-8788 bp Ori: OFP18001.1 Feature: domain Description: Tra8 Location: 7838-8765 bp Feature: domain Description: Tra8 Location: 783 8-8765 bp Feature: gene Location: 8852-10240 bp Ori: OFP18002.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9113-9578 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9113 -9578 bp Feature: gene Location: 10578-12053 bp Feature: domain Description: HsdM Location: 10599-12024 bp Feature: domain Description: HsdM Location: 10599-12024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Tra8 (COG2826), RVT-AbiP2, HsdM (COG0286)