myRT

myRT report for GCA_001815065.1_ASM181506v1

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Seq: KV819015.1 Enterococcus sp. HMSC065H03 genomic scaffold Scaffold115, whole genome shotgun sequence (11313 bp)
Overview 1 RT 1: 4591-9192 bp Neighborhood of RT #1 [4591, 9200] PRK09290 AlbA_2 RVT-AbiP2 DUF3841 HTH_XRE Feature: gene Location: 4591-5850 bp Ori: OFP16509.1 Feature: domain Description: PRK09290 Location: 4597-5842 bp Feature: domain Description: PRK09290 Location: 4597-5842 bp Feature: gene Location: 5966-6280 bp Ori: OFP16510.1 Feature: domain Description: AlbA_2 Location: 6005-6176 bp Feature: domain Description: AlbA_2 Location: 6005-61 76 bp Feature: gene Location: 6426-7922 bp Ori: OFP16516.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6834-7290 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 6834-7290 bp Feature: gene Location: 8100-8579 bp Ori: OFP16511.1 Feature: domain Description: DUF3841 Location: 8109-8484 bp Feature: domain Description: DUF3841 Location: 81 09-8484 bp Feature: gene Location: 8955-9200 bp Ori: OFP16512.1 Feature: domain Description: HTH_XRE Location: 9006-9192 bp Feature: domain Description: HTH_XRE Location: 9006-91 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09290 (allantoate amidohydrolase; Reviewed), AlbA_2 (pfam04326), RVT-AbiP2, DUF3841 (pfam12952), HTH_XRE (smart00530)

Seq: KV819185.1 Enterococcus sp. HMSC065H03 genomic scaffold Scaffold904, whole genome shotgun sequence (87068 bp)
Overview 1 RT 1: 14501-19616 bp Neighborhood of RT #1 [14501, 19616] CcmA AcrR RVT-GII GIIM Feature: gene Location: 14501-15382 bp Ori: OFP05131.1 Feature: domain Description: CcmA Location: 14504-15374 bp Feature: domain Description: CcmA Location: 14504-15374 bp Feature: gene Location: 15636-16235 bp Ori: OFP05132.1 Feature: domain Description: AcrR Location: 15654-16140 bp Feature: domain Description: AcrR Location: 15654-16140 bp Feature: gene Location: 16722-18110 bp Ori: OFP05133.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17043-17658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17043-17658 bp Feature: domain Description: GIIM Note: maturase Location: 17715-17931 bp Feature: domain Description: GIIM Note: maturase Location: 17715-17931 bp Feature: gene Location: 18203-18843 bp Feature: gene Location: 18944-19616 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), AcrR (COG1309), RVT-GII, GIIM (pfam08388)

Seq: KV819005.1 Enterococcus sp. HMSC065H03 genomic scaffold Scaffold97, whole genome shotgun sequence (2761 bp)
Overview 1 RT 1: 131-1922 bp Neighborhood of RT #1 [131, 2041] RVT-GII HNHc Feature: gene Location: 131-2041 bp Ori: OFP04768.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1202 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Feature: domain Description: HNHc Note: nucleases Location: 1757-1922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV818986.1 Enterococcus sp. HMSC065H03 genomic scaffold Scaffold57, whole genome shotgun sequence (2646 bp)
Overview 1 RT 1: 76-1075 bp Neighborhood of RT #1 [76, 1902] RVT-GII Feature: gene Location: 76-1902 bp Ori: OFP08669.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 376-1075 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: KV819083.1 Enterococcus sp. HMSC065H03 genomic scaffold Scaffold308, whole genome shotgun sequence (37584 bp)
Overview 1 RT 1: 3288-8087 bp Neighborhood of RT #1 [3288, 8092] Zeta_toxin RVT-GII HNHc FtsK Feature: gene Location: 3288-3962 bp Ori: OFP11670.1 Feature: domain Description: Zeta_toxin Location: 3387-3870 bp Feature: domain Description: Zeta_toxin Location: 3387-3870 bp Feature: gene Location: 4040-4279 bp Feature: gene Location: 4373-6232 bp Ori: OFP11672.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4682-5423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4682-5 423 bp Feature: domain Description: HNHc Note: nucleases Location: 5978-6116 bp Feature: domain Description: HNHc Note: nucleases Location: 5 978-6116 bp Feature: gene Location: 6351-6581 bp Feature: gene Location: 6965-8092 bp Feature: domain Description: FtsK Location: 7574-8087 bp Feature: domain Description: FtsK Location: 75 74-8087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zeta_toxin (pfam06414), RVT-GII, HNHc (smart00507), FtsK (COG1674)