myRT

myRT report for GCA_001815195.1_ASM181519v1

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Seq: KV819611.1 Enterococcus sp. HMSC076D08 genomic scaffold Scaffold154, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 1-2542 bp Neighborhood of RT #1 [1, 3204] HsdM RVT-AbiP2 Feature: gene Location: 1-1478 bp Ori: OFP03247.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1 447 bp Feature: gene Location: 1816-3204 bp Ori: OFP03248.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: KV819779.1 Enterococcus sp. HMSC076D08 genomic scaffold Scaffold865, whole genome shotgun sequence (131105 bp)
Overview 1 RT 1: 123648-128906 bp Neighborhood of RT #1 [123648, 128906] RVT-GII HNHc FtsK Dcm Feature: gene Location: 123648-124104 bp Feature: gene Location: 124205-124758 bp Feature: gene Location: 125457-127259 bp Ori: OFO90926.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 125751-126447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 5751-12 6447 bp Feature: domain Description: HNHc Note: nucleases Location: 126987-127146 bp Feature: domain Description: HNHc Note: nucleases Location: 12 6987-12 7146 bp Feature: gene Location: 127361-127658 bp Feature: domain Description: FtsK Location: 127373-127613 bp Feature: domain Description: FtsK Location: 12 7373-12 7613 bp Feature: gene Location: 127913-128906 bp Ori: OFO90925.1 Feature: domain Description: Dcm Location: 127916-128906 bp Feature: domain Description: Dcm Location: 12 7916-12 8906 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: KV819786.1 Enterococcus sp. HMSC076D08 genomic scaffold Scaffold939, whole genome shotgun sequence (8910 bp)
Overview 1 RT 1: 3740-8878 bp Neighborhood of RT #1 [3740, 8892] RVT-GII AAA_10 Feature: gene Location: 3740-4181 bp Feature: gene Location: 4282-5414 bp Feature: gene Location: 6114-7940 bp Ori: OFO90083.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6414-7113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6414-7113 bp Feature: gene Location: 8053-8892 bp Feature: domain Description: AAA_10 Location: 8059-8878 bp Feature: domain Description: AAA_10 Location: 8059-8878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AAA_10 (pfam12846)