myRT

myRT report for GCA_001819745.1_ASM181974v1

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Seq: MHNL01000033.1 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 rifcsphigho2_01_scaffold_62270, whole genome shotgun sequence (5216 bp)
Overview 1 RT 1: 956-4864 bp Neighborhood of RT #1 [956, 4864] Avd_like RVT-DGRs 6PGL Feature: gene Location: 956-1732 bp Feature: gene Location: 2200-2568 bp Ori: OGZ43490.1 Feature: domain Description: Avd_like Location: 2224-2536 bp Feature: domain Description: Avd_like Location: 2224-2536 bp Feature: gene Location: 2585-3616 bp Ori: OGZ43493.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2777-3404 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2777-3404 bp Feature: gene Location: 3723-4448 bp Ori: OGZ43491.1 Feature: domain Description: 6PGL Location: 3774-4437 bp Feature: domain Description: 6PGL Location: 3774-4437 bp Feature: gene Location: 4466-4864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, 6PGL (cd01400)

Seq: MHNL01000005.1 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 rifcsphigho2_01_scaffold_144, whole genome shotgun sequence (272340 bp)
Overview 1 RT 1: 102728-107653 bp Neighborhood of RT #1 [102728, 107653] Pcm RVT-Retrons HRDC xseA Feature: gene Location: 102728-103012 bp Feature: gene Location: 103461-104096 bp Ori: OGZ45709.1 Feature: domain Description: Pcm Location: 103470-104082 bp Feature: domain Description: Pcm Location: 103470-104082 bp Feature: gene Location: 104267-105190 bp Ori: OGZ45710.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104408-104942 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 104408-104942 bp Feature: gene Location: 105509-107092 bp Ori: OGZ45711.1 Feature: domain Description: HRDC Location: 105521-105713 bp Feature: domain Description: HRDC Location: 10552 1-105713 bp Feature: domain Description: xseA Location: 105791-107075 bp Feature: domain Description: xseA Location: 105791-107075 bp Feature: gene Location: 107180-107653 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Pcm (COG2518), RVT-Retrons, HRDC (smart00341), xseA (TIGR00237)

Seq: MHNL01000010.1 Candidatus Ryanbacteria bacterium RIFCSPHIGHO2_01_FULL_48_27 rifcsphigho2_01_scaffold_16551, whole genome shotgun sequence (10627 bp)
Overview 1 RT 1: 3614-9035 bp Neighborhood of RT #1 [3614, 9046] AAA_15 RVT-UG13 Nudix_Hydrolase PRK13527 Feature: gene Location: 3614-3823 bp Feature: gene Location: 3909-5834 bp Ori: OGZ45069.1 Feature: domain Description: AAA_15 Location: 3912-5121 bp Feature: domain Description: AAA_15 Location: 3 912-5121 bp Feature: gene Location: 5847-7247 bp Ori: OGZ45070.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 6297-6774 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 6297-6774 bp Feature: gene Location: 7437-8471 bp Ori: OGZ45071.1 Feature: domain Description: Nudix_Hydrolase Location: 7989-8358 bp Feature: domain Description: Nudix_Hydrolase Location: 7989-83 58 bp Feature: gene Location: 8468-9046 bp Ori: OGZ45073.1 Feature: domain Description: PRK13527 Location: 8471-9035 bp Feature: domain Description: PRK13 527 Location: 8471-903 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-UG13, Nudix_Hydrolase (cl00447), PRK13527 (glutamine amidotransferase subunit PdxT; Provisional)