myRT

myRT report for GCA_001825675.1_ASM182567v1

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Seq: MHYA01000176.1 Planctomycetes bacterium GWF2_42_9 gwf2_scaffold_6603, whole genome shotgun sequence (11340 bp)
Overview 1 RT 1: 3479-8336 bp Neighborhood of RT #1 [3479, 8656] DUF2059 RVT-UG7 PRK06524 Feature: gene Location: 3479-3925 bp Ori: OHB53219.1 Feature: domain Description: DUF2059 Location: 3716-3881 bp Feature: domain Description: DUF2059 Location: 371 6-3881 bp Feature: gene Location: 4251-4517 bp Feature: gene Location: 4875-6413 bp Ori: OHB53221.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5247-5664 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5247-5664 bp Feature: gene Location: 6457-7308 bp Feature: gene Location: 7313-8656 bp Ori: OHB53223.1 Feature: domain Description: PRK06524 Location: 7655-8336 bp Feature: domain Description: PRK06524 Location: 7655-8336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2059 (pfam09832), RVT-UG7, PRK06524 (biotin carboxylase-like protein; Validated)

Seq: MHYA01000089.1 Planctomycetes bacterium GWF2_42_9 gwf2_scaffold_25082, whole genome shotgun sequence (10141 bp)
Overview 1 RT 1: 148-4105 bp Neighborhood of RT #1 [148, 4200] RVT_N RVT-GII GIIM HARE-HTH ParB_N_like_MT YhdJ Feature: gene Location: 148-588 bp Feature: gene Location: 585-2213 bp Ori: OHB57648.1 Feature: domain Description: RVT_N Location: 636-879 bp Feature: domain Description: RVT_N Location: 636-879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 92 4-1596 bp Feature: domain Description: GIIM Note: maturase Location: 1647-1887 bp Feature: domain Description: GIIM Note: maturase Location: 1647-1887 bp Feature: gene Location: 2444-2902 bp Ori: OHB57649.1 Feature: domain Description: HARE-HTH Location: 2696-2894 bp Feature: domain Description: HARE-HTH Location: 2 696-2 894 bp Feature: gene Location: 2911-4200 bp Ori: OHB57650.1 Feature: domain Description: ParB_N_like_MT Location: 2935-3184 bp Feature: domain Description: ParB_N_like_MT Location: 2 935-3184 bp Feature: domain Description: YhdJ Location: 3358-4105 bp Feature: domain Description: YhdJ Location: 3358-4105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HARE-HTH (pfam05066), ParB_N_like_MT (cd16844), YhdJ (COG0863)

Seq: MHYA01000065.1 Planctomycetes bacterium GWF2_42_9 gwf2_scaffold_1935, whole genome shotgun sequence (36830 bp)
Overview 1 RT 1: 28714-33132 bp Neighborhood of RT #1 [28714, 33206] COG1373 HTH_Tnp_1 RVT-GII TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 28714-29004 bp Ori: OHB59053.1 Feature: domain Description: COG1373 Location: 28726-28930 bp Feature: domain Description: COG13 73 Location: 28726-2893 0 bp Feature: gene Location: 29143-29493 bp Ori: OHB59054.1 Feature: domain Description: HTH_Tnp_1 Location: 29209-29308 bp Feature: domain Description: HTH_Tnp_1 Location: 29209-293 08 bp Feature: gene Location: 30067-31356 bp Ori: OHB59055.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30322-31009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 03 22-3 1009 bp Feature: gene Location: 31549-31836 bp Ori: OHB59056.1 Feature: domain Description: TnpB_IS66 Location: 31570-31789 bp Feature: domain Description: TnpB_IS66 Location: 3 1570-3 1789 bp Feature: gene Location: 31926-33206 bp Ori: OHB59057.1 Feature: domain Description: LZ_Tnp_IS66 Location: 32037-32253 bp Feature: domain Description: LZ_Tnp_IS66 Location: 3 203 7-3 2253 bp Feature: domain Description: zf-IS66 Location: 32316-32409 bp Feature: domain Description: zf-IS66 Location: 3 23 16-3 2409 bp Feature: domain Description: DDE_Tnp_IS66 Location: 32457-33132 bp Feature: domain Description: DDE_Tnp_IS66 Location: 3 2457-3 3 13 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG1373 (Predicted ATPase, AAA+ superfamily ), HTH_Tnp_1 (pfam01527), RVT-GII, TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: MHYA01000146.1 Planctomycetes bacterium GWF2_42_9 gwf2_scaffold_461, whole genome shotgun sequence (83202 bp)
Overview 1 RT 1: 69624-78705 bp Neighborhood of RT #1 [69624, 78705] RVT-UG1 Laminin_G_3 PEP-CTERM Feature: gene Location: 69624-69905 bp Feature: gene Location: 70471-71511 bp Feature: gene Location: 71989-75615 bp Ori: OHB54610.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 72511-72967 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 72511-72967 bp Feature: gene Location: 77402-78157 bp Ori: OHB54611.1 Feature: domain Description: Laminin_G_3 Location: 77594-78071 bp Feature: domain Description: Laminin_G_3 Location: 77594 -78071 bp Feature: domain Description: PEP-CTERM Location: 78086-78134 bp Feature: domain Description: PEP-CTERM Location: 78086-78134 bp Feature: gene Location: 78394-78705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG1, Laminin_G_3 (pfam13385), PEP-CTERM