myRT

myRT report for GCA_001827585.1_ASM182758v1

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Seq: MJQW01000029.1 Listeria monocytogenes strain NRRL B-33997 PROKKA_contig000029, whole genome shotgun sequence (606262 bp)
Overview 1 RT 1: 438519-444096 bp Neighborhood of RT #1 [438519, 444096] SpoT Cah RVT-Retrons HipB ImmA Feature: gene Location: 438519-439061 bp Ori: OER12883.1 Feature: domain Description: SpoT Location: 438525-438987 bp Feature: domain Description: SpoT Location: 438525-438987 bp Feature: gene Location: 439129-439830 bp Ori: OER12884.1 Feature: domain Description: Cah Location: 439141-439825 bp Feature: domain Description: Cah Location: 4391 41 -439825 bp Feature: gene Location: 439994-441685 bp Ori: OER12885.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 440120-440720 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4401 20-440720 bp Feature: gene Location: 442118-443302 bp Ori: OER12886.1 Feature: domain Description: HipB Location: 442127-442388 bp Feature: domain Description: HipB Location: 4421 27-442388 bp Feature: domain Description: ImmA Location: 442541-443165 bp Feature: domain Description: ImmA Location: 442541 -4431 65 bp Feature: gene Location: 443335-444096 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoT (COG0317), Cah (COG3338), RVT-Retrons, HipB (COG1396), ImmA (COG2856)

Seq: MJQW01000020.1 Listeria monocytogenes strain NRRL B-33997 PROKKA_contig000020, whole genome shotgun sequence (253234 bp)
Overview 1 RT 1: 171659-177175 bp Neighborhood of RT #1 [171659, 177198] Cass2 SLATT_5 RVT-UG17 GlpR ALDH_F6_MMSDH Feature: gene Location: 171659-172078 bp Ori: OER18085.1 Feature: domain Description: Cass2 Location: 171671-172067 bp Feature: domain Description: Cass2 Location: 171671-172 067 bp Feature: gene Location: 172394-172993 bp Ori: OER18086.1 Feature: domain Description: SLATT_5 Location: 172427-172973 bp Feature: domain Description: SLATT_5 Location: 172 42 7-172 973 bp Feature: gene Location: 172990-174348 bp Ori: OER18087.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 173215-173788 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1732 15-173788 bp Feature: gene Location: 174776-175537 bp Ori: OER18088.1 Feature: domain Description: GlpR Location: 174782-175526 bp Feature: domain Description: GlpR Location: 174782 -17552 6 bp Feature: gene Location: 175732-177198 bp Ori: OER18089.1 Feature: domain Description: ALDH_F6_MMSDH Location: 175756-177175 bp Feature: domain Description: ALDH_F6_MMSDH Location: 175756-177175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cass2 (pfam14526), SLATT_5 (pfam18160), RVT-UG17, GlpR (COG1349), ALDH_F6_MMSDH (cd07085)