myRT

myRT report for GCA_001828335.1_ASM182833v1

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Seq: MHYN01000254.1 Planctomycetes bacterium RBG_16_64_12 RBG_16_scaffold_35201, whole genome shotgun sequence (6064 bp)
Overview 1 RT 1: 194-6064 bp Neighborhood of RT #1 [194, 6064] GH99 Glu_cyclase_2 RVT-Retrons PQQ_2 PQQ_2 Feature: gene Location: 194-1613 bp Feature: domain Description: GH99 Location: 332-1208 bp Feature: domain Description: GH99 Location: 332-1 208 bp Feature: gene Location: 1891-2679 bp Feature: domain Description: Glu_cyclase_2 Location: 1930-2665 bp Feature: domain Description: Glu_cyclase_2 Location: 1 930-2665 bp Feature: gene Location: 2676-3662 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2811-3432 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 281 1 -3432 bp Feature: gene Location: 3989-5260 bp Feature: domain Description: PQQ_2 Location: 4142-4502 bp Feature: domain Description: PQQ_2 Location: 41 42-4502 bp Feature: domain Description: PQQ_2 Location: 4583-5114 bp Feature: domain Description: PQQ_2 Location: 4583-51 1 4 bp Feature: gene Location: 5848-6064 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glu_cyclase_2 (pfam05096), GH99 (cd11574), RVT-Retrons, PQQ_2 (pfam13360)

Seq: MHYN01000184.1 Planctomycetes bacterium RBG_16_64_12 RBG_16_scaffold_26337, whole genome shotgun sequence (12258 bp)
Overview 1 RT 1: 3633-8357 bp Neighborhood of RT #1 [3633, 8357] RVT-GII GIIM Feature: gene Location: 3633-3863 bp Feature: gene Location: 3920-4297 bp Feature: gene Location: 5205-6515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5493-6153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5493-6153 bp Feature: domain Description: GIIM Note: maturase Location: 6228-6423 bp Feature: domain Description: GIIM Note: maturase Location: 62 2 8-642 3 bp Feature: gene Location: 6934-7701 bp Feature: gene Location: 7836-8357 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MHYN01000318.1 Planctomycetes bacterium RBG_16_64_12 RBG_16_scaffold_47542, whole genome shotgun sequence (7554 bp)
Overview 1 RT 1: 4696-7555 bp Neighborhood of RT #1 [4696, 7554] LivF DDE_5 RVT_N RVT-GII Feature: gene Location: 4696-5406 bp Feature: domain Description: LivF Location: 4702-5401 bp Feature: domain Description: LivF Location: 4702-5401 bp Feature: gene Location: 5679-6035 bp Feature: domain Description: DDE_5 Location: 5688-5991 bp Feature: domain Description: DDE_5 Location: 5688-5991 bp Feature: gene Location: 7084-7554 bp Feature: RT Description: RVT_N Location: 7141-7378 bp Feature: RT Description: RVT_N Location: 7141-73 78 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7435-7555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 743 5-7555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LivF (COG0410), DDE_5 (pfam13546), RVT_N (pfam13655), RVT-GII