myRT

myRT report for GCA_001828815.1_ASM182881v1

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Seq: MHZP01000176.1 Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450 rifcsplowo2_12_scaffold_82, whole genome shotgun sequence (148630 bp)
Overview 1 RT 1: 142208-145554 bp Neighborhood of RT #1 [142208, 145554] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 142208-142828 bp Feature: domain Description: DUF1566 Location: 142454-142811 bp Feature: domain Description: DUF1 566 Location: 1 42454-1 4281 1 bp Feature: gene Location: 142883-143239 bp Feature: domain Description: Avd_like Location: 142910-143216 bp Feature: domain Description: Avd_like Location: 1 4291 0-1 4321 6 bp Feature: gene Location: 143521-144612 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 143704-144388 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 43704-1 44388 bp Feature: gene Location: 144657-145214 bp Feature: gene Location: 145306-145554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: MHZP01000161.1 Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450 rifcsplowo2_12_scaffold_66, whole genome shotgun sequence (159849 bp)
Overview 1 RT 1: 134523-141450 bp Neighborhood of RT #1 [134523, 141479] ACR3 RVT_N RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 134523-134813 bp Feature: gene Location: 136208-137170 bp Feature: domain Description: ACR3 Location: 136223-137150 bp Feature: domain Description: ACR3 Location: 1362 2 3-137150 bp Feature: gene Location: 137535-139196 bp Feature: RT Description: RVT_N Location: 137580-137823 bp Feature: RT Description: RVT_N Location: 137580-13782 3 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137868-138504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137868-138504 bp Feature: domain Description: GIIM Note: maturase Location: 138561-138789 bp Feature: domain Description: GIIM Note: maturase Location: 138561-138789 bp Feature: gene Location: 139775-141082 bp Feature: domain Description: LZ_Tnp_IS66 Location: 139907-140114 bp Feature: domain Description: LZ_Tnp_IS66 Location: 139907-140114 bp Feature: domain Description: zf-IS66 Location: 140153-140267 bp Feature: domain Description: zf-IS66 Location: 140153-1402 67 bp Feature: domain Description: DDE_Tnp_IS66 Location: 140309-141083 bp Feature: domain Description: DDE_Tnp_IS66 Location: 140309-141083 bp Feature: gene Location: 141144-141479 bp Feature: domain Description: TnpB_IS66 Location: 141162-141450 bp Feature: domain Description: TnpB_IS66 Location: 141162 -141450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACR3 (COG0798), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)

Seq: MHZP01000045.1 Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450 rifcsplowo2_12_scaffold_173400, whole genome shotgun sequence (2416 bp)
Overview 1 RT 1: 58-2257 bp Neighborhood of RT #1 [58, 2355] IS5 RVT-GII GIIM Feature: gene Location: 58-570 bp Feature: domain Description: IS5 Location: 247-571 bp Feature: domain Description: IS5 Location: 247-571 bp Feature: gene Location: 1087-2355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1300-1957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 00-1957 bp Feature: domain Description: GIIM Note: maturase Location: 2035-2257 bp Feature: domain Description: GIIM Note: maturase Location: 203 5-2257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IS5 (COG3039)