myRT

myRT report for GCA_001829315.1_ASM182931v1

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Seq: MIAY01000028.1 Spirochaetes bacterium GWE1_32_154 gwe1_scaffold_42, whole genome shotgun sequence (103037 bp)
Overview 1 RT 1: 35085-39246 bp Neighborhood of RT #1 [35085, 39323] polC_Gram_pos SLATT_5 RVT-UG17 GrpB DUF4300 Feature: gene Location: 35085-35669 bp Ori: OHD37424.1 Feature: domain Description: polC_Gram_pos Location: 35094-35634 bp Feature: domain Description: polC_Gram_pos Location: 35094-35634 bp Feature: gene Location: 35666-36268 bp Ori: OHD37425.1 Feature: domain Description: SLATT_5 Location: 35684-36221 bp Feature: domain Description: SLATT_5 Location: 35684-36221 bp Feature: gene Location: 36281-37630 bp Ori: OHD37426.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36515-37103 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 3651 5-371 03 bp Feature: gene Location: 38017-38586 bp Ori: OHD37427.1 Feature: domain Description: GrpB Location: 38023-38503 bp Feature: domain Description: GrpB Location: 38023-38503 bp Feature: gene Location: 38580-39323 bp Ori: OHD37428.1 Feature: domain Description: DUF4300 Location: 38673-39246 bp Feature: domain Description: DUF4300 Location: 38673-39246 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polC_Gram_pos (TIGR01405), SLATT_5 (pfam18160), RVT-UG17, GrpB (pfam04229), DUF4300 (pfam14133)

Seq: MIAY01000042.1 Spirochaetes bacterium GWE1_32_154 gwe1_scaffold_868, whole genome shotgun sequence (48877 bp)
Overview 1 RT 1: 13481-19236 bp Neighborhood of RT #1 [13481, 19274] RHS_repeat RVT-GII GIIM HAD_YsbA-like Acetyltransf_1 Feature: gene Location: 13481-14440 bp Ori: OHD36067.1 Feature: domain Description: RHS_repeat Location: 13973-14072 bp Feature: domain Description: RHS_repeat Location: 13973-14072 bp Feature: gene Location: 15306-16151 bp Feature: gene Location: 16328-17563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16532-17189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16532 -17189 bp Feature: domain Description: GIIM Note: maturase Location: 17273-17489 bp Feature: domain Description: GIIM Note: maturase Location: 172 73-17489 bp Feature: gene Location: 18140-18628 bp Ori: OHD36069.1 Feature: domain Description: HAD_YsbA-like Location: 18185-18545 bp Feature: domain Description: HAD_YsbA-like Location: 18185-18545 bp Feature: gene Location: 18831-19274 bp Ori: OHD36070.1 Feature: domain Description: Acetyltransf_1 Location: 18912-19236 bp Feature: domain Description: Acetyltransf_1 Location: 18912 -192 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388), HAD_YsbA-like (cd07523), Acetyltransf_1 (pfam00583)