myRT

myRT report for GCA_001829335.1_ASM182933v1

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Seq: MIBA01000029.1 Spirochaetes bacterium GWE2_31_10 gwe2_scaffold_185, whole genome shotgun sequence (76372 bp)
Overview 1 RT 1: 35031-39192 bp Neighborhood of RT #1 [35031, 39269] polC_Gram_pos SLATT_5 RVT-UG17 GrpB DUF4300 Feature: gene Location: 35031-35615 bp Ori: OHD51313.1 Feature: domain Description: polC_Gram_pos Location: 35040-35580 bp Feature: domain Description: polC_Gram_pos Location: 35040-35580 bp Feature: gene Location: 35612-36214 bp Ori: OHD51314.1 Feature: domain Description: SLATT_5 Location: 35630-36167 bp Feature: domain Description: SLATT_5 Location: 35630-361 67 bp Feature: gene Location: 36227-37576 bp Ori: OHD51315.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36461-37049 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 36461 -37049 bp Feature: gene Location: 37963-38532 bp Ori: OHD51316.1 Feature: domain Description: GrpB Location: 37969-38449 bp Feature: domain Description: GrpB Location: 37969-38449 bp Feature: gene Location: 38526-39269 bp Ori: OHD51317.1 Feature: domain Description: DUF4300 Location: 38619-39192 bp Feature: domain Description: DUF4300 Location: 3861 9-391 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polC_Gram_pos (TIGR01405), SLATT_5 (pfam18160), RVT-UG17, GrpB (pfam04229), DUF4300 (pfam14133)

Seq: MIBA01000094.1 Spirochaetes bacterium GWE2_31_10 gwe2_scaffold_662, whole genome shotgun sequence (29572 bp)
Overview 1 RT 1: 22473-28884 bp Neighborhood of RT #1 [22473, 28967] CHB_HEX_C_1 FIVAR FIVAR Flg_new Flg_new Flg_new RVT-GII GIIM Feature: gene Location: 22473-24254 bp Feature: gene Location: 24664-27537 bp Ori: OHD46095.1 Feature: domain Description: CHB_HEX_C_1 Location: 24790-24985 bp Feature: domain Description: CHB_HEX_C_1 Location: 2 4790-2 4985 bp Feature: domain Description: FIVAR Location: 25027-25168 bp Feature: domain Description: FIVAR Location: 2 502 7-2 5168 bp Feature: domain Description: FIVAR Location: 25216-25387 bp Feature: domain Description: FIVAR Location: 2 52 16-2 5387 bp Feature: domain Description: Flg_new Location: 25399-25609 bp Feature: domain Description: Flg_new Location: 2 5399-2 5609 bp Feature: domain Description: Flg_new Location: 25630-25825 bp Feature: domain Description: Flg_new Location: 2 5630-2 582 5 bp Feature: domain Description: Flg_new Location: 25843-25999 bp Feature: domain Description: Flg_new Location: 2 5843-2 5999 bp Feature: gene Location: 28023-28967 bp Ori: OHD46096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28029-28599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 802 9-2 8599 bp Feature: domain Description: GIIM Note: maturase Location: 28671-28884 bp Feature: domain Description: GIIM Note: maturase Location: 2 8671-2 8884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHB_HEX_C_1 (pfam13290), FIVAR (pfam07554), Flg_new (pfam09479), RVT-GII, GIIM (pfam08388)