myRT

myRT report for GCA_001829345.1_ASM182934v1

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Seq: MIBB01000062.1 Spirochaetes bacterium GWF1_31_7 GWF1_Spirochaete-like_31_7_gwf1_scaffold_545, whole genome shotgun sequence (29216 bp)
Overview 1 RT 1: 22462-28873 bp Neighborhood of RT #1 [22462, 28956] CHB_HEX_C_1 FIVAR FIVAR Flg_new Flg_new Flg_new RVT-GII GIIM Feature: gene Location: 22462-24243 bp Feature: gene Location: 24653-27526 bp Ori: OHD48583.1 Feature: domain Description: CHB_HEX_C_1 Location: 24779-24974 bp Feature: domain Description: CHB_HEX_C_1 Location: 24779-24974 bp Feature: domain Description: FIVAR Location: 25016-25157 bp Feature: domain Description: FIVAR Location: 2501 6-251 57 bp Feature: domain Description: FIVAR Location: 25205-25376 bp Feature: domain Description: FIVAR Location: 25205-25376 bp Feature: domain Description: Flg_new Location: 25388-25598 bp Feature: domain Description: Flg_new Location: 25388-25598 bp Feature: domain Description: Flg_new Location: 25619-25814 bp Feature: domain Description: Flg_new Location: 2561 9-2581 4 bp Feature: domain Description: Flg_new Location: 25832-25988 bp Feature: domain Description: Flg_new Location: 25832-25988 bp Feature: gene Location: 28012-28956 bp Ori: OHD48584.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28018-28588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2801 8-28588 bp Feature: domain Description: GIIM Note: maturase Location: 28660-28873 bp Feature: domain Description: GIIM Note: maturase Location: 28660-28873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHB_HEX_C_1 (pfam13290), FIVAR (pfam07554), Flg_new (pfam09479), RVT-GII, GIIM (pfam08388)

Seq: MIBB01000028.1 Spirochaetes bacterium GWF1_31_7 GWF1_Spirochaete-like_31_7_gwf1_scaffold_215, whole genome shotgun sequence (96904 bp)
Overview 1 RT 1: 35075-39236 bp Neighborhood of RT #1 [35075, 39313] polC_Gram_pos SLATT_5 RVT-UG17 GrpB DUF4300 Feature: gene Location: 35075-35659 bp Ori: OHD51510.1 Feature: domain Description: polC_Gram_pos Location: 35084-35624 bp Feature: domain Description: polC_Gram_pos Location: 35084-3562 4 bp Feature: gene Location: 35656-36258 bp Ori: OHD51511.1 Feature: domain Description: SLATT_5 Location: 35674-36211 bp Feature: domain Description: SLATT_5 Location: 35674-362 11 bp Feature: gene Location: 36271-37620 bp Ori: OHD51512.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36505-37093 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 36505-37093 bp Feature: gene Location: 38007-38576 bp Ori: OHD51513.1 Feature: domain Description: GrpB Location: 38013-38493 bp Feature: domain Description: GrpB Location: 38013-38493 bp Feature: gene Location: 38570-39313 bp Ori: OHD51514.1 Feature: domain Description: DUF4300 Location: 38663-39236 bp Feature: domain Description: DUF4300 Location: 38663-392 36 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT polC_Gram_pos (TIGR01405), SLATT_5 (pfam18160), RVT-UG17, GrpB (pfam04229), DUF4300 (pfam14133)