myRT

myRT report for GCA_001829535.1_ASM182953v1

Download annotations/find similar RTs

Seq: MIBL01000462.1 Spirochaetes bacterium RIFOXYB1_FULL_32_8 rifoxyb1_full_scaffold_613, whole genome shotgun sequence (27085 bp)
Overview 1 RT 1: 19139-27030 bp Neighborhood of RT #1 [19139, 27053] CHB_HEX_C_1 FIVAR FIVAR Flg_new Flg_new Flg_new RVT-GII GIIM COG4099 Feature: gene Location: 19139-20920 bp Feature: gene Location: 21330-24203 bp Ori: OHD76381.1 Feature: domain Description: CHB_HEX_C_1 Location: 21456-21651 bp Feature: domain Description: CHB_HEX_C_1 Location: 21 456-21 651 bp Feature: domain Description: FIVAR Location: 21693-21834 bp Feature: domain Description: FIVAR Location: 21 693-21 834 bp Feature: domain Description: FIVAR Location: 21882-22053 bp Feature: domain Description: FIVAR Location: 21 882-22053 bp Feature: domain Description: Flg_new Location: 22065-22275 bp Feature: domain Description: Flg_new Location: 22065-22275 bp Feature: domain Description: Flg_new Location: 22296-22491 bp Feature: domain Description: Flg_new Location: 22296-22491 bp Feature: domain Description: Flg_new Location: 22509-22665 bp Feature: domain Description: Flg_new Location: 22509-22665 bp Feature: gene Location: 24689-25633 bp Ori: OHD76382.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24695-25265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24695-25265 bp Feature: domain Description: GIIM Note: maturase Location: 25337-25550 bp Feature: domain Description: GIIM Note: maturase Location: 25337-25550 bp Feature: gene Location: 26223-27053 bp Ori: OHD76383.1 Feature: domain Description: COG4099 Location: 26397-27030 bp Feature: domain Description: COG4099 Location: 26397-27030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHB_HEX_C_1 (pfam13290), FIVAR (pfam07554), Flg_new (pfam09479), RVT-GII, GIIM (pfam08388), COG4099 (Predicted peptidase )

Seq: MIBL01000083.1 Spirochaetes bacterium RIFOXYB1_FULL_32_8 rifoxyb1_full_scaffold_1507, whole genome shotgun sequence (18656 bp)
Overview 1 RT 1: 14571-18539 bp Neighborhood of RT #1 [14571, 18539] Acetyltransf_1 HAD_YsbA-like RVT-GII GIIM Feature: gene Location: 14571-15014 bp Ori: OHD82621.1 Feature: domain Description: Acetyltransf_1 Location: 14652-14976 bp Feature: domain Description: Acetyltransf_1 Location: 14652 -14976 bp Feature: gene Location: 15148-15705 bp Ori: OHD82622.1 Feature: domain Description: HAD_YsbA-like Location: 15226-15622 bp Feature: domain Description: HAD_YsbA-like Location: 152 2 6-1562 2 bp Feature: gene Location: 16282-17517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16486-17143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16486-17143 bp Feature: domain Description: GIIM Note: maturase Location: 17227-17443 bp Feature: domain Description: GIIM Note: maturase Location: 172 2 7-17443 bp Feature: gene Location: 17694-18539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_1 (pfam00583), HAD_YsbA-like (cd07523), RVT-GII, GIIM (pfam08388)

Seq: MIBL01000249.1 Spirochaetes bacterium RIFOXYB1_FULL_32_8 rifoxyb1_full_scaffold_30704, whole genome shotgun sequence (1601 bp)
Overview 1 RT 1: 1-1485 bp Neighborhood of RT #1 [1, 1541] RVT-UG13 RelE PhdYeFM_antitox Feature: gene Location: 1-778 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 415-778 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 415-778 bp Feature: gene Location: 958-1272 bp Ori: OHD80075.1 Feature: domain Description: RelE Location: 964-1240 bp Feature: domain Description: RelE Location: 964-1240 bp Feature: gene Location: 1269-1541 bp Ori: OHD80076.1 Feature: domain Description: PhdYeFM_antitox Location: 1290-1485 bp Feature: domain Description: PhdYeFM_antitox Location: 1290-1485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13, RelE (pfam06296), PhdYeFM_antitox (pfam02604)