myRT

myRT report for GCA_001829675.1_ASM182967v1

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Seq: MIBZ01000007.1 Sulfurimonas sp. RIFCSPLOWO2_12_36_12 rifcsplowo2_12_sub10_scaffold_133, whole genome shotgun sequence (29861 bp)
Overview 1 RT 1: 27504-29861 bp Neighborhood of RT #1 [27504, 29861] RVT-CRISPR Cas_Cas1 Feature: gene Location: 27504-27830 bp Feature: gene Location: 27861-28136 bp Feature: gene Location: 28139-29861 bp Ori: OHE02876.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 28340-28949 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 28340-28949 bp Feature: domain Description: Cas_Cas1 Location: 29417-29861 bp Feature: domain Description: Cas_Cas1 Location: 2941 7-29861 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: MIBZ01000031.1 Sulfurimonas sp. RIFCSPLOWO2_12_36_12 rifcsplowo2_12_sub10_scaffold_2663, whole genome shotgun sequence (10750 bp)
Overview 1 RT 1: 7342-10720 bp Neighborhood of RT #1 [7342, 10720] PhdYeFM_antitox RelE RVT-Retrons TIR_2 COG4710 Feature: gene Location: 7342-7593 bp Ori: OHE01753.1 Feature: domain Description: PhdYeFM_antitox Location: 7369-7567 bp Feature: domain Description: PhdYeFM_antitox Location: 7369-7567 bp Feature: gene Location: 7583-7873 bp Ori: OHE01754.1 Feature: domain Description: RelE Location: 7586-7844 bp Feature: domain Description: RelE Location: 7586-7844 bp Feature: gene Location: 8037-9548 bp Ori: OHE01755.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8208-8817 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 82 08-8817 bp Feature: domain Description: TIR_2 Location: 9156-9492 bp Feature: domain Description: TIR_2 Location: 9156-9492 bp Feature: gene Location: 9987-10445 bp Ori: OHE01756.1 Feature: domain Description: COG4710 Location: 10029-10152 bp Feature: domain Description: COG4710 Location: 1002 9-10152 bp Feature: gene Location: 10442-10720 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RelE (pfam06296), RVT-Retrons, TIR_2 (pfam13676), COG4710 (Predicted DNA-binding protein with an HTH domain )

Seq: MIBZ01000043.1 Sulfurimonas sp. RIFCSPLOWO2_12_36_12 rifcsplowo2_12_sub10_scaffold_41, whole genome shotgun sequence (74007 bp)
Overview 1 RT 1: 41192-45625 bp Neighborhood of RT #1 [41192, 46104] miaA SIR2 RVT-UG17 SLATT_5 COG3943 Feature: gene Location: 41192-42103 bp Ori: OHE01287.1 Feature: domain Description: miaA Location: 41204-42059 bp Feature: domain Description: miaA Location: 41204-42059 bp Feature: gene Location: 42179-42895 bp Ori: OHE01288.1 Feature: domain Description: SIR2 Location: 42185-42875 bp Feature: domain Description: SIR2 Location: 42185-42875 bp Feature: gene Location: 43139-44482 bp Ori: OHE01289.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 43376-43982 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 43 3 76-43 982 bp Feature: gene Location: 44473-45042 bp Ori: OHE01290.1 Feature: domain Description: SLATT_5 Location: 44485-45013 bp Feature: domain Description: SLATT_5 Location: 44485-45013 bp Feature: gene Location: 45238-46104 bp Ori: OHE01291.1 Feature: domain Description: COG3943 Location: 45265-45625 bp Feature: domain Description: COG3 943 Location: 45265-45625 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT miaA (TIGR00174), SIR2 (pfam02146), RVT-UG17, SLATT_5 (pfam18160), COG3943 (Uncharacterized conserved protein )