myRT

myRT report for GCA_001829715.1_ASM182971v1

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Seq: MICC01000016.1 Sulfurimonas sp. RIFOXYB12_FULL_35_9 rifoxyb3_full_scaffold_154, whole genome shotgun sequence (50283 bp)
Overview 1 RT 1: 1-4553 bp Neighborhood of RT #1 [1, 4555] RVT-Retrons AAA_15 PRK08482 Feature: gene Location: 1-1108 bp Ori: OHE06146.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 130-703 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 30-703 bp Feature: gene Location: 1271-3475 bp Ori: OHE06147.1 Feature: domain Description: AAA_15 Location: 1274-2210 bp Feature: domain Description: AAA_1 5 Location: 1 274-221 0 bp Feature: gene Location: 4241-4555 bp Ori: OHE06148.1 Feature: domain Description: PRK08482 Location: 4244-4553 bp Feature: domain Description: PRK08482 Location: 4244-4553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_15 (pfam13175), PRK08482 (F0F1 ATP synthase subunit C; Validated)

Seq: MICC01000058.1 Sulfurimonas sp. RIFOXYB12_FULL_35_9 rifoxyb3_full_scaffold_307, whole genome shotgun sequence (27152 bp)
Overview 1 RT 1: 17198-23704 bp Neighborhood of RT #1 [17198, 23790] Csx3_III-U Csx1_III-U RVT-CRISPR Cas1_I-II-III Cas2_I_II_III NTP_transf_8 Feature: gene Location: 17198-17491 bp Ori: OHE05237.1 Feature: domain Description: Csx3_III-U Location: 17243-17477 bp Feature: domain Description: Csx3_III-U Location: 172 43-17477 bp Feature: gene Location: 17488-18975 bp Ori: OHE05238.1 Feature: domain Description: Csx1_III-U Location: 17725-17884 bp Feature: domain Description: Csx1_III-U Location: 1772 5-17884 bp Feature: gene Location: 18965-21202 bp Ori: OHE05239.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 19166-19778 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 19166-19778 bp Feature: domain Description: Cas1_I-II-III Location: 20243-21167 bp Feature: domain Description: Cas1_I-II-III Location: 2 02 43-2 1167 bp Feature: gene Location: 21202-21483 bp Ori: OHE05240.1 Feature: domain Description: Cas2_I_II_III Location: 21217-21448 bp Feature: domain Description: Cas2 _I_II_III Location: 2 12 17-2 1448 bp Feature: gene Location: 22786-23790 bp Ori: OHE05241.1 Feature: domain Description: NTP_transf_8 Location: 23137-23704 bp Feature: domain Description: NTP_transf_8 Location: 2 3137-2 3704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Csx3_III-U (cl09837), Csx1_III-U (cl21570), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442), NTP_transf_8 (pfam12281)