myRT

myRT report for GCA_001829785.1_ASM182978v1

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Seq: MICF01000001.1 Sulfurimonas sp. RIFOXYD12_FULL_33_39 rifoxyd3_full_scaffold_1, whole genome shotgun sequence (311531 bp)
Overview 1 RT 1: 198256-204901 bp Neighborhood of RT #1 [198256, 204930] GlnK DUF1016_N YhcG_C RVT-UG5 COG3943 PRK05932 Feature: gene Location: 198256-198654 bp Ori: OHE10882.1 Feature: domain Description: GlnK Location: 198259-198580 bp Feature: domain Description: GlnK Location: 1 98259-1 98580 bp Feature: gene Location: 198850-199920 bp Ori: OHE10883.1 Feature: domain Description: DUF1016_N Location: 198895-199297 bp Feature: domain Description: DUF1 01 6_N Location: 1 98895-1 99297 bp Feature: domain Description: YhcG_C Location: 199378-199837 bp Feature: domain Description: YhcG_C Location: 1 99378-1 99837 bp Feature: gene Location: 199898-202999 bp Ori: OHE10884.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 200408-200906 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 200408-200906 bp Feature: gene Location: 202996-203553 bp Ori: OHE10885.1 Feature: domain Description: COG3943 Location: 203020-203494 bp Feature: domain Description: COG3943 Location: 203020-203494 bp Feature: gene Location: 203662-204930 bp Ori: OHE10886.1 Feature: domain Description: PRK05932 Location: 203671-204901 bp Feature: domain Description: PRK05932 Location: 203671 -204901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GlnK (COG0347), DUF1016_N (pfam17761), YhcG_C, RVT-UG5, COG3943 (Uncharacterized conserved protein ), PRK05932 (RNA polymerase factor sigma-54; Reviewed)

Seq: MICF01000007.1 Sulfurimonas sp. RIFOXYD12_FULL_33_39 rifoxyd3_full_scaffold_3, whole genome shotgun sequence (374781 bp)
Overview 1 RT 1: 366808-371464 bp Neighborhood of RT #1 [366808, 371464] RVT-DGRs Avd_like Feature: gene Location: 366808-367275 bp Feature: gene Location: 367272-367823 bp Feature: gene Location: 367820-368815 bp Ori: OHE09525.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 368030-368615 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 368030-368615 bp Feature: gene Location: 369070-369471 bp Ori: OHE09526.1 Feature: domain Description: Avd_like Location: 369100-369448 bp Feature: domain Description: Avd_like Location: 369100-369448 bp Feature: gene Location: 369503-371464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: MICF01000002.1 Sulfurimonas sp. RIFOXYD12_FULL_33_39 rifoxyd3_full_scaffold_111, whole genome shotgun sequence (72133 bp)
Overview 1 RT 1: 66497-70479 bp Neighborhood of RT #1 [66497, 70502] RVT-Retrons ParE_toxin Feature: gene Location: 66497-66754 bp Feature: gene Location: 66895-67782 bp Feature: gene Location: 67847-69655 bp Ori: OHE10700.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68045-68618 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68045-68618 bp Feature: gene Location: 69974-70216 bp Feature: gene Location: 70209-70502 bp Ori: OHE10702.1 Feature: domain Description: ParE_toxin Location: 70221-70479 bp Feature: domain Description: ParE_toxin Location: 70221-70479 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ParE_toxin (pfam05016)