myRT

myRT report for GCA_001830775.1_ASM183077v1

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Seq: MIBX01000132.1 Sulfurimonas sp. RIFCSPHIGHO2_12_FULL_36_9 rifcsphigho2_12_scaffold_8294, whole genome shotgun sequence (16822 bp)
Overview 1 RT 1: 12986-16561 bp Neighborhood of RT #1 [12986, 16590] miaA SIR2 RVT-UG17 SLATT_5 Feature: gene Location: 12986-13897 bp Ori: OHD96403.1 Feature: domain Description: miaA Location: 12998-13853 bp Feature: domain Description: miaA Location: 1 2998-1 3853 bp Feature: gene Location: 13973-14689 bp Ori: OHD96404.1 Feature: domain Description: SIR2 Location: 13979-14669 bp Feature: domain Description: SIR2 Location: 1 3979-1 4669 bp Feature: gene Location: 14933-16276 bp Ori: OHD96405.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 15170-15776 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 51 70-1 5776 bp Feature: gene Location: 16267-16590 bp Ori: OHD96406.1 Feature: domain Description: SLATT_5 Location: 16285-16561 bp Feature: domain Description: SLATT_5 Location: 1 6285-1 6561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT miaA (TIGR00174), SIR2 (pfam02146), RVT-UG17, SLATT_5 (pfam18160)

Seq: MIBX01000109.1 Sulfurimonas sp. RIFCSPHIGHO2_12_FULL_36_9 rifcsphigho2_12_scaffold_5240, whole genome shotgun sequence (16460 bp)
Overview 1 RT 1: 3913-7291 bp Neighborhood of RT #1 [3913, 7291] PhdYeFM_antitox RelE RVT-Retrons TIR_2 COG4710 Feature: gene Location: 3913-4164 bp Ori: OHD97097.1 Feature: domain Description: PhdYeFM_antitox Location: 3940-4138 bp Feature: domain Description: PhdYeFM_antitox Location: 3940-4138 bp Feature: gene Location: 4154-4444 bp Ori: OHD97098.1 Feature: domain Description: RelE Location: 4157-4415 bp Feature: domain Description: RelE Location: 4157-4415 bp Feature: gene Location: 4608-6119 bp Ori: OHD97099.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4779-5388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4779-5388 bp Feature: domain Description: TIR_2 Location: 5727-6063 bp Feature: domain Description: TIR_2 Location: 572 7-6063 bp Feature: gene Location: 6558-7016 bp Ori: OHD97100.1 Feature: domain Description: COG4710 Location: 6600-6723 bp Feature: domain Description: COG4710 Location: 6600-672 3 bp Feature: gene Location: 7013-7291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), RelE (pfam06296), RVT-Retrons, TIR_2 (pfam13676), COG4710 (Predicted DNA-binding protein with an HTH domain )

Seq: MIBX01000082.1 Sulfurimonas sp. RIFCSPHIGHO2_12_FULL_36_9 rifcsphigho2_12_scaffold_31913, whole genome shotgun sequence (7362 bp)
Overview 1 RT 1: 1-5417 bp Neighborhood of RT #1 [1, 5417] RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 1-602 bp Feature: gene Location: 633-908 bp Feature: gene Location: 911-3142 bp Ori: OHD97866.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1112-1721 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1112-1721 bp Feature: domain Description: Cas1_I-II-III Location: 2186-3104 bp Feature: domain Description: Cas1_I-II-III Location: 2186-3 104 bp Feature: gene Location: 3143-3424 bp Ori: OHD97867.1 Feature: domain Description: Cas2_I_II_III Location: 3152-3365 bp Feature: domain Description: Cas2_I_II_III Location: 3 152-3 3 65 bp Feature: gene Location: 5097-5417 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)