myRT

myRT report for GCA_001830805.1_ASM183080v1

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Seq: MICH01000015.1 Sulfurimonas sp. RIFOXYD2_FULL_34_21 rifoxyd2_full_scaffold_9, whole genome shotgun sequence (374633 bp)
Overview 1 RT 1: 3302-7958 bp Neighborhood of RT #1 [3302, 7958] Avd_like RVT-DGRs Feature: gene Location: 3302-5263 bp Feature: gene Location: 5295-5696 bp Ori: OHE12693.1 Feature: domain Description: Avd_like Location: 5325-5673 bp Feature: domain Description: Avd_like Location: 5325-5673 bp Feature: gene Location: 5951-6946 bp Ori: OHE12694.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6161-6746 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61 61 -6746 bp Feature: gene Location: 6943-7494 bp Feature: gene Location: 7491-7958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs

Seq: MICH01000011.1 Sulfurimonas sp. RIFOXYD2_FULL_34_21 rifoxyd2_full_scaffold_7, whole genome shotgun sequence (311526 bp)
Overview 1 RT 1: 106620-113220 bp Neighborhood of RT #1 [106620, 113294] PRK05932 COG3943 RVT-UG5 DUF1016_N YhcG_C GlnK Feature: gene Location: 106620-107888 bp Ori: OHE13344.1 Feature: domain Description: PRK05932 Location: 106629-107859 bp Feature: domain Description: PRK05932 Location: 10662 9-107859 bp Feature: gene Location: 107997-108554 bp Ori: OHE13345.1 Feature: domain Description: COG3943 Location: 108021-108495 bp Feature: domain Description: COG3943 Location: 10802 1-108495 bp Feature: gene Location: 108551-111652 bp Ori: OHE13346.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 109061-109559 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 109061-109559 bp Feature: gene Location: 111630-112700 bp Ori: OHE13347.1 Feature: domain Description: DUF1016_N Location: 111675-112077 bp Feature: domain Description: DUF1016_N Location: 111675-112 077 bp Feature: domain Description: YhcG_C Location: 112158-112617 bp Feature: domain Description: YhcG_C Location: 112 158-112 617 bp Feature: gene Location: 112896-113294 bp Ori: OHE13348.1 Feature: domain Description: GlnK Location: 112899-113220 bp Feature: domain Description: GlnK Location: 112 899-1132 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05932 (RNA polymerase factor sigma-54; Reviewed), COG3943 (Uncharacterized conserved protein ), RVT-UG5, DUF1016_N (pfam17761), YhcG_C, GlnK (COG0347)

Seq: MICH01000013.1 Sulfurimonas sp. RIFOXYD2_FULL_34_21 rifoxyd2_full_scaffold_79, whole genome shotgun sequence (72152 bp)
Overview 1 RT 1: 66499-70481 bp Neighborhood of RT #1 [66499, 70504] RVT-Retrons ParE_toxin Feature: gene Location: 66499-66756 bp Feature: gene Location: 66897-67784 bp Feature: gene Location: 67849-69657 bp Ori: OHE13213.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68047-68620 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68047-68620 bp Feature: gene Location: 69976-70218 bp Feature: gene Location: 70211-70504 bp Ori: OHE13215.1 Feature: domain Description: ParE_toxin Location: 70223-70481 bp Feature: domain Description: ParE_toxin Location: 70223 -70481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ParE_toxin (pfam05016)