myRT

myRT report for GCA_001830985.1_ASM183098v1

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Seq: MIDI01000098.1 Thermodesulfovibrio sp. RBG_19FT_COMBO_42_12 rbg_19ft_combo_scaffold_22450, whole genome shotgun sequence (6112 bp)
Overview 1 RT 1: 2794-5923 bp Neighborhood of RT #1 [2794, 6027] YjbM RVT-GII GIIM Feature: gene Location: 2794-2979 bp Feature: gene Location: 3063-3977 bp Feature: domain Description: YjbM Location: 3081-3639 bp Feature: domain Description: YjbM Location: 3081 -3639 bp Feature: gene Location: 4705-6027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4996-5644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4996-5644 bp Feature: domain Description: GIIM Note: maturase Location: 5713-5923 bp Feature: domain Description: GIIM Note: maturase Location: 571 3-5923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbM (COG2357), RVT-GII, GIIM (pfam08388)

Seq: MIDI01000128.1 Thermodesulfovibrio sp. RBG_19FT_COMBO_42_12 rbg_19ft_combo_scaffold_308, whole genome shotgun sequence (41478 bp)
Overview 1 RT 1: 22545-26646 bp Neighborhood of RT #1 [22545, 26675] DDE_Tnp_IS240 dCache_2 RVT-GII GIIM Gp49 HTH_XRE Feature: gene Location: 22545-23021 bp Feature: domain Description: DDE_Tnp_IS240 Location: 22653-22839 bp Feature: domain Description: DDE_Tnp_IS2 40 Location: 2 2 653-2 2 839 bp Feature: gene Location: 23248-23808 bp Feature: domain Description: dCache_2 Location: 23521-23734 bp Feature: domain Description: dCache_2 Location: 2 352 1-2 3734 bp Feature: gene Location: 24196-25497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24481-25117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 4481-2 5117 bp Feature: domain Description: GIIM Note: maturase Location: 25189-25408 bp Feature: domain Description: GIIM Note: maturase Location: 2 5189-2 5408 bp Feature: gene Location: 26054-26386 bp Feature: domain Description: Gp49 Location: 26093-26366 bp Feature: domain Description: Gp49 Location: 2 6093-2 6366 bp Feature: gene Location: 26379-26675 bp Feature: domain Description: HTH_XRE Location: 26484-26646 bp Feature: domain Description: HTH_XRE Location: 2 6484-2 6646 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS240 (pfam13610), dCache_2 (pfam08269), RVT-GII, GIIM (pfam08388), Gp49 (pfam05973), HTH_XRE (smart00530)