myRT

myRT report for GCA_001831995.1_ASM183199v1

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Seq: MLRZ01000013.1 Salmonella enterica strain CFSAN044889 CFSAN044889_13, whole genome shotgun sequence (92219 bp)
Overview 1 RT 1: 8210-12045 bp Neighborhood of RT #1 [8210, 12045] PRK09738 RVT_N RVT-GII YkfC HNHc HTH_XRE Feature: gene Location: 8210-8536 bp Feature: gene Location: 8740-8919 bp Ori: OHI09315.1 Feature: domain Description: PRK09738 Location: 8743-8896 bp Feature: domain Description: PRK09738 Location: 8743-8896 bp Feature: gene Location: 9476-11149 bp Ori: OHI09316.1 Feature: domain Description: RVT_N Location: 9536-9779 bp Feature: domain Description: RVT_N Location: 9536-9779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9824-10466 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9824-1 0466 bp Feature: domain Description: YkfC Location: 10595-10766 bp Feature: domain Description: YkfC Location: 1 0595-1 0766 bp Feature: domain Description: HNHc Note: nucleases Location: 10964-11126 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0964-1 1 1 26 bp Feature: gene Location: 11395-11664 bp Ori: OHI09317.1 Feature: domain Description: HTH_XRE Location: 11410-11512 bp Feature: domain Description: HTH_XRE Location: 1 1 41 0-1 1 51 2 bp Feature: gene Location: 11758-12045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), HTH_XRE (smart00530)

Seq: MLRZ01000006.1 Salmonella enterica strain CFSAN044889 CFSAN044889_6, whole genome shotgun sequence (339846 bp)
Overview 1 RT 1: 90657-96939 bp Neighborhood of RT #1 [90657, 96941] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90657-91418 bp Feature: gene Location: 91418-91690 bp Ori: OHI11092.1 Feature: domain Description: PRK09678 Location: 91427-91586 bp Feature: domain Description: PRK09678 Location: 9142 7-91586 bp Feature: gene Location: 92077-93354 bp Ori: OHI11093.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92365-92860 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92 365-92 860 bp Feature: gene Location: 93345-95363 bp Ori: OHI11094.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: gene Location: 95941-96135 bp Feature: gene Location: 96183-96941 bp Ori: OHI11096.1 Feature: domain Description: PRK15246 Location: 96243-96939 bp Feature: domain Description: PRK152 46 Location: 962 43-96939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)