myRT

myRT report for GCA_001832045.1_ASM183204v1

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Seq: MLSB01000013.1 Salmonella enterica strain CFSAN044891 CFSAN044891_13, whole genome shotgun sequence (103049 bp)
Overview 1 RT 1: 80175-84010 bp Neighborhood of RT #1 [80175, 84010] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 80175-80462 bp Feature: gene Location: 80556-80825 bp Ori: OHI12827.1 Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: domain Description: HTH_XRE Location: 80571 -80673 bp Feature: gene Location: 81071-82744 bp Ori: OHI12828.1 Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: domain Description: RVT_N Location: 81 1 31 -81 374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 41 9-82061 bp Feature: domain Description: YkfC Location: 82190-82361 bp Feature: domain Description: YkfC Location: 821 90-82361 bp Feature: domain Description: HNHc Note: nucleases Location: 82559-82721 bp Feature: domain Description: HNHc Note: nucleases Location: 82559-82721 bp Feature: gene Location: 83301-83480 bp Ori: OHI12829.1 Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: gene Location: 83684-84010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)

Seq: MLSB01000005.1 Salmonella enterica strain CFSAN044891 CFSAN044891_5, whole genome shotgun sequence (339841 bp)
Overview 1 RT 1: 90657-96939 bp Neighborhood of RT #1 [90657, 96941] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90657-91418 bp Feature: gene Location: 91418-91690 bp Ori: OHI15618.1 Feature: domain Description: PRK09678 Location: 91427-91586 bp Feature: domain Description: PRK09678 Location: 9142 7-91586 bp Feature: gene Location: 92077-93354 bp Ori: OHI15619.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92365-92860 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92 365-92 860 bp Feature: gene Location: 93345-95363 bp Ori: OHI15620.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: gene Location: 95941-96135 bp Feature: gene Location: 96183-96941 bp Ori: OHI15622.1 Feature: domain Description: PRK15246 Location: 96243-96939 bp Feature: domain Description: PRK152 46 Location: 962 43-96939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)