myRT

myRT report for GCA_001832125.1_ASM183212v1

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Seq: MLSE01000007.1 Salmonella enterica strain CFSAN044894 CFSAN044894_7, whole genome shotgun sequence (339856 bp)
Overview 1 RT 1: 90667-96949 bp Neighborhood of RT #1 [90667, 96951] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90667-91428 bp Feature: gene Location: 91428-91700 bp Ori: OHI29301.1 Feature: domain Description: PRK09678 Location: 91437-91596 bp Feature: domain Description: PRK09678 Location: 91 437-91 596 bp Feature: gene Location: 92087-93364 bp Ori: OHI29302.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92375-92870 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92375-92870 bp Feature: gene Location: 93355-95373 bp Ori: OHI29303.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93928-94381 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93928-94381 bp Feature: gene Location: 95951-96145 bp Feature: gene Location: 96193-96951 bp Ori: OHI29305.1 Feature: domain Description: PRK15246 Location: 96253-96949 bp Feature: domain Description: PRK1 5246 Location: 96253-96949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)

Seq: MLSE01000013.1 Salmonella enterica strain CFSAN044894 CFSAN044894_13, whole genome shotgun sequence (103001 bp)
Overview 1 RT 1: 80175-84010 bp Neighborhood of RT #1 [80175, 84010] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 80175-80462 bp Feature: gene Location: 80556-80825 bp Ori: OHI26262.1 Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: gene Location: 81071-82744 bp Ori: OHI26263.1 Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82 061 bp Feature: domain Description: YkfC Location: 82190-82361 bp Feature: domain Description: YkfC Location: 82 190-82 361 bp Feature: domain Description: HNHc Note: nucleases Location: 82559-82721 bp Feature: domain Description: HNHc Note: nucleases Location: 82 559-82 72 1 bp Feature: gene Location: 83301-83480 bp Ori: OHI26264.1 Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: gene Location: 83684-84010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)