myRT

myRT report for GCA_001832675.1_ASM183267v1

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Seq: MLSD01000001.1 Salmonella enterica strain CFSAN044893 CFSAN044893_1, whole genome shotgun sequence (811564 bp)
Overview 1 RT 1: 714624-720908 bp Neighborhood of RT #1 [714624, 720908] PRK15246 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 714624-715382 bp Ori: OHI28726.1 Feature: domain Description: PRK15246 Location: 714684-715380 bp Feature: domain Description: PRK1 5246 Location: 71 4684-71 5380 bp Feature: gene Location: 715430-715624 bp Feature: gene Location: 716202-718220 bp Ori: OHI28728.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 716775-717228 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 71 6775-71 7228 bp Feature: gene Location: 718211-719488 bp Ori: OHI28729.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 718499-718994 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 71 8499-71 8994 bp Feature: gene Location: 719875-720147 bp Ori: OHI28730.1 Feature: domain Description: PRK09678 Location: 719884-720043 bp Feature: domain Description: PRK09678 Location: 71 9884-720043 bp Feature: gene Location: 720147-720908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: MLSD01000015.1 Salmonella enterica strain CFSAN044893 CFSAN044893_15, whole genome shotgun sequence (103037 bp)
Overview 1 RT 1: 80175-84010 bp Neighborhood of RT #1 [80175, 84010] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 80175-80462 bp Feature: gene Location: 80556-80825 bp Ori: OHI22328.1 Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: domain Description: HTH_XRE Location: 80571-80673 bp Feature: gene Location: 81071-82744 bp Ori: OHI22329.1 Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: domain Description: RVT_N Location: 81131-81374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81419-82 061 bp Feature: domain Description: YkfC Location: 82190-82361 bp Feature: domain Description: YkfC Location: 82 190-82 361 bp Feature: domain Description: HNHc Note: nucleases Location: 82559-82721 bp Feature: domain Description: HNHc Note: nucleases Location: 82 559-82 72 1 bp Feature: gene Location: 83301-83480 bp Ori: OHI22330.1 Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: domain Description: PRK09738 Location: 83304-83457 bp Feature: gene Location: 83684-84010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)