myRT

myRT report for GCA_001833255.1_ASM183325v1

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Seq: MLSX01000014.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 CFSAN044921_14, whole genome shotgun sequence (103029 bp)
Overview 1 RT 1: 19022-22857 bp Neighborhood of RT #1 [19022, 22857] PRK09738 RVT_N RVT-GII YkfC HNHc HTH_XRE Feature: gene Location: 19022-19348 bp Feature: gene Location: 19552-19731 bp Ori: OHJ18299.1 Feature: domain Description: PRK09738 Location: 19555-19708 bp Feature: domain Description: PRK09738 Location: 1 9555-1 9708 bp Feature: gene Location: 20288-21961 bp Ori: OHJ18300.1 Feature: domain Description: RVT_N Location: 20348-20591 bp Feature: domain Description: RVT_N Location: 20348-20591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20636-21278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20636-21 278 bp Feature: domain Description: YkfC Location: 21407-21578 bp Feature: domain Description: YkfC Location: 21 407-21 578 bp Feature: domain Description: HNHc Note: nucleases Location: 21776-21938 bp Feature: domain Description: HNHc Note: nucleases Location: 21 776-21 938 bp Feature: gene Location: 22207-22476 bp Ori: OHJ18301.1 Feature: domain Description: HTH_XRE Location: 22222-22324 bp Feature: domain Description: HTH_XRE Location: 22222-22324 bp Feature: gene Location: 22570-22857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09738 (small toxic polypeptide; Provisional), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), HTH_XRE (smart00530)

Seq: MLSX01000006.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044921 CFSAN044921_6, whole genome shotgun sequence (307131 bp)
Overview 1 RT 1: 90634-96908 bp Neighborhood of RT #1 [90634, 96910] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90634-91395 bp Feature: gene Location: 91395-91667 bp Ori: OHJ21218.1 Feature: domain Description: PRK09678 Location: 91404-91563 bp Feature: domain Description: PRK09678 Location: 91404-91563 bp Feature: gene Location: 92046-93323 bp Ori: OHJ21219.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92334-92829 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92 334-92 82 9 bp Feature: gene Location: 93314-95332 bp Ori: OHJ21220.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93887-94340 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93887-94340 bp Feature: gene Location: 95910-96104 bp Feature: gene Location: 96152-96910 bp Ori: OHJ21222.1 Feature: domain Description: PRK15246 Location: 96212-96908 bp Feature: domain Description: PRK152 46 Location: 962 12 -96908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)