myRT

myRT report for GCA_001833705.1_ASM183370v1

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Seq: MLUJ01000006.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044964 CFSAN044964_6, whole genome shotgun sequence (339856 bp)
Overview 1 RT 1: 90667-96949 bp Neighborhood of RT #1 [90667, 96951] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90667-91428 bp Feature: gene Location: 91428-91700 bp Ori: OHK92814.1 Feature: domain Description: PRK09678 Location: 91437-91596 bp Feature: domain Description: PRK09678 Location: 91 437-91 596 bp Feature: gene Location: 92087-93364 bp Ori: OHK92815.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92375-92870 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92375-92870 bp Feature: gene Location: 93355-95373 bp Ori: OHK92816.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93928-94381 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93928-94381 bp Feature: gene Location: 95951-96145 bp Feature: gene Location: 96193-96951 bp Ori: OHK92818.1 Feature: domain Description: PRK15246 Location: 96253-96949 bp Feature: domain Description: PRK1 5246 Location: 96253-96949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)

Seq: MLUJ01000017.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044964 CFSAN044964_17, whole genome shotgun sequence (67458 bp)
Overview 1 RT 1: 44638-48473 bp Neighborhood of RT #1 [44638, 48473] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 44638-44925 bp Feature: gene Location: 45019-45288 bp Ori: OHK90896.1 Feature: domain Description: HTH_XRE Location: 45034-45136 bp Feature: domain Description: HTH_XRE Location: 45034-45136 bp Feature: gene Location: 45534-47207 bp Ori: OHK90897.1 Feature: domain Description: RVT_N Location: 45594-45837 bp Feature: domain Description: RVT_N Location: 45594-45837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45882-46524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45882 -4652 4 bp Feature: domain Description: YkfC Location: 46653-46824 bp Feature: domain Description: YkfC Location: 46653-4682 4 bp Feature: domain Description: HNHc Note: nucleases Location: 47022-47184 bp Feature: domain Description: HNHc Note: nucleases Location: 4702 2 -47184 bp Feature: gene Location: 47764-47943 bp Ori: OHK90898.1 Feature: domain Description: PRK09738 Location: 47767-47920 bp Feature: domain Description: PRK09738 Location: 47767-4792 0 bp Feature: gene Location: 48147-48473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)