myRT

myRT report for GCA_001833825.1_ASM183382v1

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Seq: MLUQ01000007.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044972 CFSAN044972_7, whole genome shotgun sequence (342422 bp)
Overview 1 RT 1: 245482-251766 bp Neighborhood of RT #1 [245482, 251766] PRK15246 RVT-UG8 RVT-UG3 PRK09678 Feature: gene Location: 245482-246240 bp Ori: OHL24752.1 Feature: domain Description: PRK15246 Location: 245542-246238 bp Feature: domain Description: PRK1 5246 Location: 245542-246238 bp Feature: gene Location: 246288-246482 bp Feature: gene Location: 247060-249078 bp Ori: OHL24754.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 247633-248086 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 247633-248086 bp Feature: gene Location: 249069-250346 bp Ori: OHL24755.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 249357-249852 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 249357-249852 bp Feature: gene Location: 250733-251005 bp Ori: OHL24756.1 Feature: domain Description: PRK09678 Location: 250742-250901 bp Feature: domain Description: PRK09678 Location: 250742-250901 bp Feature: gene Location: 251005-251766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15246 (fimbrial assembly chaperone), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional)

Seq: MLUQ01000014.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN044972 CFSAN044972_14, whole genome shotgun sequence (103044 bp)
Overview 1 RT 1: 80176-84011 bp Neighborhood of RT #1 [80176, 84011] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 80176-80463 bp Feature: gene Location: 80557-80826 bp Ori: OHL21630.1 Feature: domain Description: HTH_XRE Location: 80572-80674 bp Feature: domain Description: HTH_XRE Location: 80572 -80674 bp Feature: gene Location: 81072-82745 bp Ori: OHL21631.1 Feature: domain Description: RVT_N Location: 81132-81375 bp Feature: domain Description: RVT_N Location: 81132 -81375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81420-82062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8142 0-82 062 bp Feature: domain Description: YkfC Location: 82191-82362 bp Feature: domain Description: YkfC Location: 82 191-82 362 bp Feature: domain Description: HNHc Note: nucleases Location: 82560-82722 bp Feature: domain Description: HNHc Note: nucleases Location: 82 560-82 72 2 bp Feature: gene Location: 83302-83481 bp Ori: OHL21632.1 Feature: domain Description: PRK09738 Location: 83305-83458 bp Feature: domain Description: PRK09738 Location: 83305-83458 bp Feature: gene Location: 83685-84011 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)