myRT

myRT report for GCA_001834285.1_ASM183428v1

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Seq: MLVR01000005.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN045005 CFSAN045005_5, whole genome shotgun sequence (339837 bp)
Overview 1 RT 1: 90648-96930 bp Neighborhood of RT #1 [90648, 96932] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90648-91409 bp Feature: gene Location: 91409-91681 bp Ori: OHM54941.1 Feature: domain Description: PRK09678 Location: 91418-91577 bp Feature: domain Description: PRK09678 Location: 91 41 8-91 577 bp Feature: gene Location: 92068-93345 bp Ori: OHM54942.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92356-92851 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92356-92851 bp Feature: gene Location: 93336-95354 bp Ori: OHM54943.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93909-94362 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93909-94362 bp Feature: gene Location: 95932-96126 bp Feature: gene Location: 96174-96932 bp Ori: OHM54945.1 Feature: domain Description: PRK15246 Location: 96234-96930 bp Feature: domain Description: PRK1 5246 Location: 96234-96930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)

Seq: MLVR01000016.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN045005 CFSAN045005_16, whole genome shotgun sequence (102348 bp)
Overview 1 RT 1: 79498-83333 bp Neighborhood of RT #1 [79498, 83333] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 79498-79785 bp Feature: gene Location: 79879-80148 bp Ori: OHM49876.1 Feature: domain Description: HTH_XRE Location: 79894-79996 bp Feature: domain Description: HTH_XRE Location: 79894-79996 bp Feature: gene Location: 80394-82067 bp Ori: OHM49877.1 Feature: domain Description: RVT_N Location: 80454-80697 bp Feature: domain Description: RVT_N Location: 80454-80697 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80742-81384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80742 -81384 bp Feature: domain Description: YkfC Location: 81513-81684 bp Feature: domain Description: YkfC Location: 81513-81684 bp Feature: domain Description: HNHc Note: nucleases Location: 81882-82044 bp Feature: domain Description: HNHc Note: nucleases Location: 81882 -82 044 bp Feature: gene Location: 82624-82803 bp Ori: OHM49878.1 Feature: domain Description: PRK09738 Location: 82627-82780 bp Feature: domain Description: PRK09738 Location: 82 62 7-82 780 bp Feature: gene Location: 83007-83333 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)