myRT

myRT report for GCA_001834625.1_ASM183462v1

Download annotations/find similar RTs

Seq: MLWR01000006.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN045048 CFSAN045048_6, whole genome shotgun sequence (317339 bp)
Overview 1 RT 1: 90657-96939 bp Neighborhood of RT #1 [90657, 96941] PRK09678 RVT-UG3 RVT-UG8 PRK15246 Feature: gene Location: 90657-91418 bp Feature: gene Location: 91418-91690 bp Ori: OHN68337.1 Feature: domain Description: PRK09678 Location: 91427-91586 bp Feature: domain Description: PRK09678 Location: 91 427-91 586 bp Feature: gene Location: 92077-93354 bp Ori: OHN68338.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92365-92860 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 92365-92860 bp Feature: gene Location: 93345-95363 bp Ori: OHN68339.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9391 8-94371 bp Feature: gene Location: 95941-96135 bp Feature: gene Location: 96183-96941 bp Ori: OHN68341.1 Feature: domain Description: PRK15246 Location: 96243-96939 bp Feature: domain Description: PRK1 5246 Location: 96243-96939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PRK15246 (fimbrial assembly chaperone)

Seq: MLWR01000018.1 Salmonella enterica subsp. enterica serovar Rubislaw strain CFSAN045048 CFSAN045048_18, whole genome shotgun sequence (68105 bp)
Overview 1 RT 1: 45237-49072 bp Neighborhood of RT #1 [45237, 49072] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 45237-45524 bp Feature: gene Location: 45618-45887 bp Ori: OHN64128.1 Feature: domain Description: HTH_XRE Location: 45633-45735 bp Feature: domain Description: HTH_XRE Location: 45633-45735 bp Feature: gene Location: 46133-47806 bp Ori: OHN64129.1 Feature: domain Description: RVT_N Location: 46193-46436 bp Feature: domain Description: RVT_N Location: 46193-46436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46481-47123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46481-4712 3 bp Feature: domain Description: YkfC Location: 47252-47423 bp Feature: domain Description: YkfC Location: 472 52 -4742 3 bp Feature: domain Description: HNHc Note: nucleases Location: 47621-47783 bp Feature: domain Description: HNHc Note: nucleases Location: 4762 1-47783 bp Feature: gene Location: 48363-48542 bp Ori: OHN64130.1 Feature: domain Description: PRK09738 Location: 48366-48519 bp Feature: domain Description: PRK09738 Location: 48366-48519 bp Feature: gene Location: 48746-49072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)