myRT

myRT report for GCA_001836555.1_ASM183655v1

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Seq: KV829252.1 Enterococcus sp. HMSC060D07 genomic scaffold Scaffold868, whole genome shotgun sequence (13305 bp)
Overview 1 RT 1: 154-3242 bp Neighborhood of RT #1 [154, 3242] RVT-GII HNHc Feature: gene Location: 154-2013 bp Ori: OHP17507.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1 204 bp Feature: domain Description: HNHc Note: nucleases Location: 1759-1897 bp Feature: domain Description: HNHc Note: nucleases Location: 1 759-1 897 bp Feature: gene Location: 2132-2362 bp Feature: gene Location: 2746-3242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: KV828990.1 Enterococcus sp. HMSC060D07 genomic scaffold Scaffold9, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 84-3256 bp Neighborhood of RT #1 [84, 3287] RVT-AbiP2 HsdM Feature: gene Location: 84-1472 bp Ori: OHP16948.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 345-810 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 345-810 bp Feature: gene Location: 1810-3287 bp Ori: OHP16947.1 Feature: domain Description: HsdM Location: 1831-3256 bp Feature: domain Description: HsdM Location: 1831-32 56 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: KV829049.1 Enterococcus sp. HMSC060D07 genomic scaffold Scaffold109, whole genome shotgun sequence (7004 bp)
Overview 1 RT 1: 2331-6735 bp Neighborhood of RT #1 [2331, 6854] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc Feature: gene Location: 2331-2621 bp Feature: gene Location: 2880-4064 bp Ori: OHP30501.1 Feature: domain Description: HTH_XRE Location: 2910-3054 bp Feature: domain Description: HTH_XRE Location: 2910-3 054 bp Feature: domain Description: Rol_Rep_N Location: 3087-3351 bp Feature: domain Description: Rol_Rep_N Location: 3 087-3 3 51 bp Feature: domain Description: Rep_trans Location: 3375-3987 bp Feature: domain Description: Rep_trans Location: 3 3 75-3 987 bp Feature: gene Location: 4944-6854 bp Ori: OHP30502.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5277-6015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5277-6015 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-6735 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-673 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507)

Seq: KV829129.1 Enterococcus sp. HMSC060D07 genomic scaffold Scaffold298, whole genome shotgun sequence (23343 bp)
Overview 1 RT 1: 15136-20976 bp Neighborhood of RT #1 [15136, 20981] VirB4 RVT-GII HNHc MazE Feature: gene Location: 15136-15729 bp Feature: gene Location: 15892-17586 bp Ori: OHP25697.1 Feature: domain Description: VirB4 Location: 16210-16894 bp Feature: domain Description: VirB4 Location: 16210-16894 bp Feature: gene Location: 18274-20151 bp Ori: OHP25698.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18589-19327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18589-19327 bp Feature: domain Description: HNHc Note: nucleases Location: 19885-20038 bp Feature: domain Description: HNHc Note: nucleases Location: 19885-20038 bp Feature: gene Location: 20339-20659 bp Feature: gene Location: 20718-20981 bp Ori: OHP25700.1 Feature: domain Description: MazE Location: 20739-20976 bp Feature: domain Description: MazE Location: 20739-20976 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirB4 (COG3451), RVT-GII, HNHc (smart00507), MazE (COG2336)