myRT

myRT report for GCA_001836575.1_ASM183657v1

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Seq: KV829564.1 Enterococcus sp. HMSC060D09 genomic scaffold Scaffold960, whole genome shotgun sequence (13301 bp)
Overview 1 RT 1: 9429-13032 bp Neighborhood of RT #1 [9429, 13148] FtsK RVT-GII HNHc Feature: gene Location: 9429-10556 bp Feature: domain Description: FtsK Location: 10089-10551 bp Feature: domain Description: FtsK Location: 1 0089-1 0551 bp Feature: gene Location: 10940-11170 bp Feature: gene Location: 11289-13148 bp Ori: OHP21951.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11598-12339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 598-1 2339 bp Feature: domain Description: HNHc Note: nucleases Location: 12894-13032 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2894-1 3032 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RVT-GII, HNHc (smart00507)

Seq: KV829366.1 Enterococcus sp. HMSC060D09 genomic scaffold Scaffold116, whole genome shotgun sequence (7004 bp)
Overview 1 RT 1: 2331-6735 bp Neighborhood of RT #1 [2331, 6854] HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc Feature: gene Location: 2331-2621 bp Feature: gene Location: 2880-4064 bp Ori: OHP33792.1 Feature: domain Description: HTH_XRE Location: 2910-3054 bp Feature: domain Description: HTH_XRE Location: 2 910-3054 bp Feature: domain Description: Rol_Rep_N Location: 3087-3351 bp Feature: domain Description: Rol_Rep_N Location: 3087-3351 bp Feature: domain Description: Rep_trans Location: 3375-3987 bp Feature: domain Description: Rep_trans Location: 3375-3987 bp Feature: gene Location: 4944-6854 bp Ori: OHP33793.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5277-6015 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 77-6015 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-6735 bp Feature: domain Description: HNHc Note: nucleases Location: 6570-6735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), RVT-GII, HNHc (smart00507)

Seq: KV829358.1 Enterococcus sp. HMSC060D09 genomic scaffold Scaffold107, whole genome shotgun sequence (20634 bp)
Overview 1 RT 1: 1-5499 bp Neighborhood of RT #1 [1, 5499] RVT-GII HNHc VirB4 Feature: gene Location: 1-296 bp Feature: gene Location: 484-2361 bp Ori: OHP34678.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-1537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 799-153 7 bp Feature: domain Description: HNHc Note: nucleases Location: 2095-2248 bp Feature: domain Description: HNHc Note: nucleases Location: 2095-2248 bp Feature: gene Location: 3049-4743 bp Ori: OHP34679.1 Feature: domain Description: VirB4 Location: 3367-4051 bp Feature: domain Description: VirB4 Location: 3 3 67-4051 bp Feature: gene Location: 4906-5499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), VirB4 (COG3451)

Seq: KV829333.1 Enterococcus sp. HMSC060D09 genomic scaffold Scaffold68, whole genome shotgun sequence (3287 bp)
Overview 1 RT 1: 1-2542 bp Neighborhood of RT #1 [1, 3204] HsdM RVT-AbiP2 Feature: gene Location: 1-1478 bp Ori: OHP23591.1 Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-14 4 7 bp Feature: gene Location: 1816-3204 bp Ori: OHP23592.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-2542 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2077-254 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2