myRT

myRT report for GCA_001853385.1_ASM185338v1

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Seq: LVIE01000185.1 Providencia stuartii strain Crippen contig_45, whole genome shotgun sequence (6294 bp)
Overview 1 RT 1: 1-5833 bp Neighborhood of RT #1 [1, 5880] RVT-UG10 lplA PRK15121 Feature: gene Location: 1-3981 bp Ori: OHT23361.1 Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 13-622 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 3-622 bp Feature: gene Location: 4377-5267 bp Gene: lplA Feature: domain Description: lplA Location: 4380-5262 bp Feature: domain Description: lplA Location: 4380-5262 bp Feature: gene Location: 5509-5880 bp Ori: OHT23362.1 Feature: domain Description: PRK15121 Location: 5521-5833 bp Feature: domain Description: PRK1 51 21 Location: 5521 -5833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10, lplA (PRK03822), PRK15121 (MDR efflux pump AcrAB transcriptional activator RobA)

Seq: LVIE01000173.1 Providencia stuartii strain Crippen contig_34, whole genome shotgun sequence (29966 bp)
Overview 1 RT 1: 16805-23732 bp Neighborhood of RT #1 [16805, 23732] FimD SLR PRK11901 RVT-UG4 Fimbrial Feature: gene Location: 16805-19366 bp Feature: domain Description: FimD Location: 16832-19361 bp Feature: domain Description: FimD Location: 16832 -19361 bp Feature: gene Location: 19530-20657 bp Ori: OHT23727.1 Feature: domain Description: SLR Location: 19536-19656 bp Feature: domain Description: SLR Location: 19536-19656 bp Feature: domain Description: PRK11901 Location: 20355-20484 bp Feature: domain Description: PRK11901 Location: 2 0355-2 0484 bp Feature: gene Location: 20693-22726 bp Ori: OHT23728.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 21104-21551 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 1104-2 1551 bp Feature: domain Description: Fimbrial Location: 22274-22718 bp Feature: domain Description: Fimbrial Location: 2 2 2 74-2 2 718 bp Feature: gene Location: 22835-23383 bp Feature: gene Location: 23499-23732 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimD (COG3188), SLR (sd00010), PRK11901 (hypothetical protein; Reviewed), RVT-UG4, Fimbrial (pfam00419)