myRT

myRT report for GCA_001853485.1_ASM185348v1

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Seq: MIKE01000026.1 Flavobacterium spartansii strain MSU NODE_6_length_359210_cov_45.7802, whole genome shotgun sequence (359210 bp)
Overview 1 RT 1: 51289-57917 bp Neighborhood of RT #1 [51289, 57917] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Feature: gene Location: 51289-51603 bp Ori: OHT43762.1 Feature: domain Description: DUF4133 Location: 51313-51580 bp Feature: domain Description: DUF41 33 Location: 51 31 3-51 580 bp Feature: gene Location: 51636-53987 bp Feature: domain Description: Bac_Flav_CT_G Location: 51648-53988 bp Feature: domain Description: Bac_Flav_CT_G Location: 51 648-53988 bp Feature: gene Location: 54551-56365 bp Ori: OHT43983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54815-55637 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5481 5-55637 bp Feature: domain Description: Intron_maturas2 Location: 55772-56000 bp Feature: domain Description: Intron_maturas2 Location: 55772-56000 bp Feature: domain Description: HNHc Note: nucleases Location: 56186-56336 bp Feature: domain Description: HNHc Note: nucleases Location: 561 86-56336 bp Feature: gene Location: 56604-57287 bp Feature: gene Location: 57303-57917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MIKE01000027.1 Flavobacterium spartansii strain MSU NODE_7_length_344708_cov_44.3436, whole genome shotgun sequence (344708 bp)
Overview 1 RT 1: 330808-336290 bp Neighborhood of RT #1 [330808, 336391] RVT-UG2 AbiEii Feature: gene Location: 330808-331362 bp Feature: gene Location: 331437-331652 bp Feature: gene Location: 332083-333669 bp Ori: OHT43692.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 332347-333268 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 332 347-3332 68 bp Feature: gene Location: 335006-335290 bp Feature: gene Location: 335741-336391 bp Ori: OHT43694.1 Feature: domain Description: AbiEii Location: 335783-336290 bp Feature: domain Description: AbiEii Location: 335783-3362 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, AbiEii (pfam08843)