myRT

myRT report for GCA_001854205.1_ASM185420v1

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Seq: CP017708.1 Moorea producens JHB sequence (9373345 bp)
Overview 1 RT 1: 283496-289643 bp 2 RT 2: 1036453-1041444 bp 3 RT 3: 1806106-1813063 bp 4 RT 4: 2348973-2365883 bp 5 RT 5: 2571284-2577669 bp 6 RT 6: 2582017-2588448 bp 7 RT 7: 2680802-2689003 bp 8 RT 8: 2801537-2811164 bp 9 RT 9: 2977346-2987680 bp 10 RT 10: 3153707-3158240 bp 11 RT 11: 4173114-4180407 bp 12 RT 12: 4987880-4997701 bp 13 RT 13: 5483208-5491540 bp 14 RT 14: 5505797-5510665 bp 15 RT 15: 6195819-6198814 bp 16 RT 16: 6357665-6364404 bp 17 RT 17: 6529926-6535958 bp 18 RT 18: 7566840-7571992 bp 19 RT 19: 7598863-7606838 bp 20 RT 20: 7847576-7857073 bp 21 RT 21: 9145641-9154271 bp 22 RT 22: 9262046-9268678 bp Neighborhood of RT #1 [283496, 289642] PRK11728 Methyltransf_23 Methyltransf_14 RVT-GII RVT-GII GIIM McrA RVT_N InsQ Neighborhood of RT #2 [1036453, 1041444] InsQ COG2452 RVT_N RVT-GII Snapin_Pallidin Neighborhood of RT #3 [1806106, 1813074] crypto_DASH RVT_N RVT-GII GIIM McrA InsQ Y1_Tnp Neighborhood of RT #4 [2348973, 2366158] STKc_PknB_like COG3899 GAF TMAO_torS RVT_N RVT-GII GIIM McrA STKc_PknB_like COG3899 COG3899 GAF TMAO_torS Neighborhood of RT #5 [2571284, 2577669] RVT_N RVT-GII RVT-GII GIIM RVT_N RVT-GII RVT-GII GIIM McrA PRK09294 Neighborhood of RT #6 [2582017, 2588971] FAAL RVT_N RVT-GII GIIM McrA InsQ HTH_MerR-trunc Neighborhood of RT #7 [2680802, 2689011] XisI pfam03781 RVT_N RVT-GII RVT-GII GIIM McrA HAD PLN02591 Neighborhood of RT #8 [2801537, 2811164] AcpP RVT_N RVT-GII GIIM McrA RVT_N RVT-GII InsQ Neighborhood of RT #9 [2977346, 2987709] InsQ HTH_17 RVT_N RVT-GII group_II_RT_mat HNHc FhaB FhaB FhaB FhaB Neighborhood of RT #10 [3153707, 3158257] RVT-Retrons XisI XisH XisH Neighborhood of RT #11 [4173114, 4180407] RVT-GII GIIM HNHc RVT-GII GIIM YhhI Neighborhood of RT #12 [4987880, 4997757] FhaB PPC FhaB FhaB RVT-GII GIIM RVT_N RVT-GII InsQ TPR TPR TPR TPR TPR Neighborhood of RT #13 [5483208, 5491545] InsQ RVT_N RVT-GII RVT-GII McrA InsQ RVT_N RVT-GII GIIM YkuD_like Neighborhood of RT #14 [5505797, 5510703] RHH_1 RVT_N RVT-GII RVT-GII PRK05920 Neighborhood of RT #15 [6195819, 6198814] GIIM RVT-GII RVT-GII RVT_N RVT-GII Neighborhood of RT #16 [6357665, 6364436] HflC DUF4340 DUF4340 RVT-GII GIIM McrA RVT_N RVT-GII InsQ Methyltransf_11 Neighborhood of RT #17 [6529926, 6535958] RVT_N RVT-GII RVT-GII GIIM Neighborhood of RT #18 [7566840, 7572000] Y1_Tnp RVT_N RVT-GII GIIM KOG1238 CFF1 Neighborhood of RT #19 [7598863, 7606838] DUF4096 tspaseT_teng_C RVT_N RVT-GII RVT-GII GIIM RVT_N RVT-GII Neighborhood of RT #20 [7847576, 7857105] PRK13837 glnL TMAO_torS TMAO_torS TMAO_torS COG4251 COG4251 RVT-GII GIIM McrA RVT_N RVT-GII InsQ COG2452 Neighborhood of RT #21 [9145641, 9154271] TilS InsQ RVT_N RVT-GII RVT-GII GIIM McrA RVT_N RVT-GII PRK13981 Neighborhood of RT #22 [9262046, 9268678] InsQ RVT_N RVT-GII Feature: gene Location: 283496-284704 bp Ori: AOY78701.1 Feature: domain Description: PRK11728 Location: 283499-284669 bp Feature: domain Description: PRK1 1 728 Location: 283499-284669 bp Feature: gene Location: 284803-285990 bp Ori: AOY84450.1 Feature: domain Description: Methyltransf_23 Location: 285112-285532 bp Feature: domain Description: Methyltransf_23 Location: 2851 1 2-285532 bp Feature: domain Description: Methyltransf_14 Location: 285655-285946 bp Feature: domain Description: Methyltransf_1 4 Location: 285655-285946 bp Feature: gene Location: 286262-287443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286268-286679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286268-286679 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286679-286847 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 286679-286847 bp Feature: domain Description: GIIM Note: maturase Location: 286904-287084 bp Feature: domain Description: GIIM Note: maturase Location: 286904-287084 bp Feature: domain Description: McrA Location: 287099-287402 bp Feature: domain Description: McrA Location: 287099-287402 bp Feature: gene Location: 287524-287949 bp Ori: AOY78702.1 Feature: domain Description: RVT_N Location: 287617-287863 bp Feature: domain Description: RVT_N Location: 28761 7-287863 bp Feature: gene Location: 288458-289642 bp Feature: domain Description: InsQ Location: 288518-289643 bp Feature: domain Description: InsQ Location: 28851 8-289643 bp Feature: gene Location: 1036453-1036929 bp Ori: AOY79197.1 Feature: domain Description: InsQ Location: 1036540-1036927 bp Feature: domain Description: InsQ Location: 1 036540-1 036927 bp Feature: gene Location: 1036940-1037548 bp Ori: AOY79198.1 Feature: domain Description: COG2452 Location: 1036958-1037498 bp Feature: domain Description: COG2452 Location: 1 036958-1 037498 bp Feature: gene Location: 1037818-1038349 bp Feature: domain Description: RVT_N Location: 1037854-1038100 bp Feature: domain Description: RVT_N Location: 1 037854-1 0381 00 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038151-1038343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0381 51 -1 038343 bp Feature: gene Location: 1040241-1040888 bp Ori: AOY79199.1 Feature: domain Description: Snapin_Pallidin Location: 1040556-1040772 bp Feature: domain Description: Snapin_Pallidin Location: 1 040556-1 040772 bp Feature: gene Location: 1041169-1041444 bp Feature: gene Location: 1806106-1807626 bp Ori: AOY84541.1 Feature: domain Description: crypto_DASH Location: 1806121-1807456 bp Feature: domain Description: crypto_DASH Location: 1 8061 21 -1 807456 bp Feature: gene Location: 1808030-1808260 bp Feature: gene Location: 1809300-1810928 bp Ori: AOY84542.1 Feature: domain Description: RVT_N Location: 1809336-1809534 bp Feature: domain Description: RVT_N Location: 1 809336-1 809534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1809576-1810227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 809576-1 81 0227 bp Feature: domain Description: GIIM Note: maturase Location: 1810305-1810539 bp Feature: domain Description: GIIM Note: maturase Location: 1 81 0305-1 81 0539 bp Feature: domain Description: McrA Location: 1810614-1810890 bp Feature: domain Description: McrA Location: 1 81 061 4-1 81 0890 bp Feature: gene Location: 1811689-1812597 bp Feature: domain Description: InsQ Location: 1811731-1812589 bp Feature: domain Description: InsQ Location: 1 81 1 731 -1 81 2589 bp Feature: gene Location: 1812676-1813074 bp Ori: AOY84543.1 Feature: domain Description: Y1_Tnp Location: 1812712-1813063 bp Feature: domain Description: Y1 _Tnp Location: 1 81 271 2-1 81 3063 bp Feature: gene Location: 2348973-2355137 bp Ori: AOY80039.1 Feature: domain Description: STKc_PknB_like Location: 2348994-2349792 bp Feature: domain Description: STKc_PknB_like Location: 2348994-2349792 bp Feature: domain Description: COG3899 Location: 2349885-2352585 bp Feature: domain Description: COG3899 Location: 2349885-2352585 bp Feature: domain Description: GAF Location: 2353239-2353581 bp Feature: domain Description: GAF Location: 2353239-2353581 bp Feature: domain Description: TMAO_torS Location: 2353602-2354898 bp Feature: domain Description: TMAO_torS Location: 2353602-2354898 bp Feature: gene Location: 2355544-2355889 bp Feature: gene Location: 2356127-2357653 bp Ori: AOY80040.1 Feature: domain Description: RVT_N Location: 2356166-2356412 bp Feature: domain Description: RVT_N Location: 23561 66-235641 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356463-2357057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2356463-2357057 bp Feature: domain Description: GIIM Note: maturase Location: 2357114-2357297 bp Feature: domain Description: GIIM Note: maturase Location: 23571 1 4-2357297 bp Feature: domain Description: McrA Location: 2357369-2357615 bp Feature: domain Description: McrA Location: 2357369-235761 5 bp Feature: gene Location: 2358193-2358399 bp Feature: gene Location: 2359832-2366158 bp Ori: AOY80041.1 Feature: domain Description: STKc_PknB_like Location: 2359865-2360708 bp Feature: domain Description: STKc_PknB_like Location: 2359865-2360708 bp Feature: domain Description: COG3899 Location: 2360801-2361923 bp Feature: domain Description: COG3899 Location: 2360801 -2361 923 bp Feature: domain Description: COG3899 Location: 2362064-2363594 bp Feature: domain Description: COG3899 Location: 2362064-2363594 bp Feature: domain Description: GAF Location: 2364158-2364704 bp Feature: domain Description: GAF Location: 23641 58-2364704 bp Feature: domain Description: TMAO_torS Location: 2364710-2365883 bp Feature: domain Description: TMAO_torS Location: 236471 0-2365883 bp Feature: gene Location: 2571284-2571706 bp Ori: AOY80170.1 Feature: domain Description: RVT_N Location: 2571323-2571569 bp Feature: domain Description: RVT_N Location: 2571 323-2571 569 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571611-2571695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2571 61 1 -2571 695 bp Feature: gene Location: 2572023-2572998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2572065-2572263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2572065-2572263 bp Feature: domain Description: GIIM Note: maturase Location: 2572341-2572575 bp Feature: domain Description: GIIM Note: maturase Location: 2572341 -2572575 bp Feature: gene Location: 2573737-2574090 bp Ori: AOY80171.1 Feature: domain Description: RVT_N Location: 2573758-2573998 bp Feature: domain Description: RVT_N Location: 2573758-2573998 bp Feature: gene Location: 2574171-2575373 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2574177-2574609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25741 77-2574609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2574615-2574780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 257461 5-2574780 bp Feature: domain Description: GIIM Note: maturase Location: 2574837-2575017 bp Feature: domain Description: GIIM Note: maturase Location: 2574837-257501 7 bp Feature: domain Description: McrA Location: 2575077-2575338 bp Feature: domain Description: McrA Location: 2575077-2575338 bp Feature: gene Location: 2575687-2576958 bp Ori: AOY84594.1 Feature: domain Description: PRK09294 Location: 2575732-2576893 bp Feature: domain Description: PRK09294 Location: 2575732-2576893 bp Feature: gene Location: 2577108-2577669 bp Feature: gene Location: 2582017-2583837 bp Ori: AOY80178.1 Feature: domain Description: FAAL Location: 2582074-2583724 bp Feature: domain Description: FAAL Location: 2582074-2583724 bp Feature: gene Location: 2584052-2584423 bp Feature: gene Location: 2584992-2586677 bp Ori: AOY80180.1 Feature: domain Description: RVT_N Location: 2585037-2585283 bp Feature: domain Description: RVT_N Location: 2585037-2585283 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2585325-2585976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2585325-2585976 bp Feature: domain Description: GIIM Note: maturase Location: 2586063-2586288 bp Feature: domain Description: GIIM Note: maturase Location: 2586063-2586288 bp Feature: domain Description: McrA Location: 2586339-2586636 bp Feature: domain Description: McrA Location: 2586339-2586636 bp Feature: gene Location: 2587208-2588329 bp Ori: AOY80181.1 Feature: domain Description: InsQ Location: 2587247-2588282 bp Feature: domain Description: InsQ Location: 2587247-2588282 bp Feature: gene Location: 2588316-2588971 bp Feature: domain Description: HTH_MerR-trunc Location: 2588331-2588448 bp Feature: domain Description: HTH_MerR-trunc Location: 2588331 -2588448 bp Feature: gene Location: 2680802-2681143 bp Ori: AOY80219.1 Feature: domain Description: XisI Location: 2680805-2681138 bp Feature: domain Description: XisI Location: 2680805-2681 1 38 bp Feature: gene Location: 2681295-2682311 bp Ori: AOY80220.1 Feature: domain Description: pfam03781 Location: 2681421-2682291 bp Feature: domain Description: pfam03781 Location: 2681 421 -2682291 bp Feature: gene Location: 2683591-2685099 bp Ori: AOY80221.1 Feature: domain Description: RVT_N Location: 2683615-2683861 bp Feature: domain Description: RVT_N Location: 268361 5-2683861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2683912-2684335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268391 2-2684335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684344-2684506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2684344-2684506 bp Feature: domain Description: GIIM Note: maturase Location: 2684563-2684743 bp Feature: domain Description: GIIM Note: maturase Location: 2684563-2684743 bp Feature: domain Description: McrA Location: 2684755-2685064 bp Feature: domain Description: McrA Location: 2684755-2685064 bp Feature: gene Location: 2685822-2686673 bp Ori: AOY84601.1 Feature: domain Description: HAD Location: 2685966-2686506 bp Feature: domain Description: HAD Location: 2685966-2686506 bp Feature: gene Location: 2688214-2689011 bp Ori: AOY80222.1 Feature: domain Description: PLN02591 Location: 2688262-2689003 bp Feature: domain Description: PLN02591 Location: 2688262-2689003 bp Feature: gene Location: 2801537-2801812 bp Ori: AOY80292.1 Feature: domain Description: AcpP Location: 2801549-2801789 bp Feature: domain Description: AcpP Location: 2801 549-2801 789 bp Feature: gene Location: 2802508-2802927 bp Feature: gene Location: 2804410-2806086 bp Ori: AOY80293.1 Feature: domain Description: RVT_N Location: 2804446-2804692 bp Feature: domain Description: RVT_N Location: 2804446-2804692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2804734-2805385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2804734-2805385 bp Feature: domain Description: GIIM Note: maturase Location: 2805469-2805697 bp Feature: domain Description: GIIM Note: maturase Location: 2805469-2805697 bp Feature: domain Description: McrA Location: 2805778-2806045 bp Feature: domain Description: McrA Location: 2805778-2806045 bp Feature: gene Location: 2806629-2808151 bp Feature: domain Description: RVT_N Location: 2806674-2806920 bp Feature: domain Description: RVT_N Location: 2806674-2806920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2806962-2807046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2806962-2807046 bp Feature: gene Location: 2808730-2809341 bp Feature: domain Description: InsQ Location: 2808763-2809339 bp Feature: domain Description: InsQ Location: 2808763-2809339 bp Feature: gene Location: 2809971-2811164 bp Feature: gene Location: 2977346-2978230 bp Ori: AOY80406.1 Feature: domain Description: InsQ Location: 2977358-2978171 bp Feature: domain Description: InsQ Location: 2977358-29781 71 bp Feature: gene Location: 2978887-2979333 bp Ori: AOY80407.1 Feature: domain Description: HTH_17 Location: 2978917-2979025 bp Feature: domain Description: HTH_1 7 Location: 297891 7-2979025 bp Feature: gene Location: 2980404-2982242 bp Ori: AOY80408.1 Feature: domain Description: RVT_N Location: 2980446-2980701 bp Feature: domain Description: RVT_N Location: 2980446-2980701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2980743-2981424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2980743-2981 424 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2981544-2981796 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2981 544-2981 796 bp Feature: domain Description: HNHc Note: nucleases Location: 2982060-2982216 bp Feature: domain Description: HNHc Note: nucleases Location: 2982060-298221 6 bp Feature: gene Location: 2982407-2982613 bp Feature: gene Location: 2983543-2987709 bp Ori: AOY80410.1 Feature: domain Description: FhaB Location: 2983576-2984884 bp Feature: domain Description: FhaB Location: 2983576-2984884 bp Feature: domain Description: FhaB Location: 2984947-2985259 bp Feature: domain Description: FhaB Location: 2984947-2985259 bp Feature: domain Description: FhaB Location: 2985415-2986327 bp Feature: domain Description: FhaB Location: 298541 5-2986327 bp Feature: domain Description: FhaB Location: 2986615-2987680 bp Feature: domain Description: FhaB Location: 298661 5-2987680 bp Feature: gene Location: 3153707-3154387 bp Feature: gene Location: 3154593-3155309 bp Feature: gene Location: 3155530-3156942 bp Ori: AOY80520.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3156076-3156697 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31 56076-31 56697 bp Feature: gene Location: 3157467-3157808 bp Ori: AOY80521.1 Feature: domain Description: XisI Location: 3157470-3157803 bp Feature: domain Description: XisI Location: 31 57470-31 57803 bp Feature: gene Location: 3157796-3158257 bp Feature: domain Description: XisH Location: 3157802-3157955 bp Feature: domain Description: XisH Location: 31 57802-31 57955 bp Feature: domain Description: XisH Location: 3158000-3158240 bp Feature: domain Description: XisH Location: 31 58000-31 58240 bp Feature: gene Location: 4173114-4173407 bp Feature: gene Location: 4173844-4174603 bp Feature: gene Location: 4175217-4176878 bp Ori: AOY81138.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4175499-4176183 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 75499-41 761 83 bp Feature: domain Description: GIIM Note: maturase Location: 4176249-4176474 bp Feature: domain Description: GIIM Note: maturase Location: 41 76249-41 76474 bp Feature: domain Description: HNHc Note: nucleases Location: 4176699-4176855 bp Feature: domain Description: HNHc Note: nucleases Location: 41 76699-41 76855 bp Feature: gene Location: 4177085-4178061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4177097-4177277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 77097-41 77277 bp Feature: domain Description: GIIM Note: maturase Location: 4177358-4177589 bp Feature: domain Description: GIIM Note: maturase Location: 41 77358-41 77589 bp Feature: gene Location: 4178163-4178875 bp Feature: domain Description: YhhI Location: 4178184-4178319 bp Feature: domain Description: YhhI Location: 41 781 84-41 7831 9 bp Feature: gene Location: 4179061-4180407 bp Feature: gene Location: 4987880-4988479 bp Feature: gene Location: 4988965-4992277 bp Ori: AOY81622.1 Feature: domain Description: FhaB Location: 4989106-4990441 bp Feature: domain Description: FhaB Location: 49891 06-4990441 bp Feature: domain Description: PPC Location: 4990654-4990909 bp Feature: domain Description: PPC Location: 4990654-4990909 bp Feature: domain Description: FhaB Location: 4991080-4991578 bp Feature: domain Description: FhaB Location: 4991 080-4991 578 bp Feature: domain Description: FhaB Location: 4991665-4992274 bp Feature: domain Description: FhaB Location: 4991 665-4992274 bp Feature: gene Location: 4992378-4993149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4992381-4992618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4992381 -499261 8 bp Feature: domain Description: GIIM Note: maturase Location: 4992705-4992930 bp Feature: domain Description: GIIM Note: maturase Location: 4992705-4992930 bp Feature: gene Location: 4993467-4993736 bp Ori: AOY81623.1 Feature: domain Description: RVT_N Location: 4993470-4993599 bp Feature: domain Description: RVT_N Location: 4993470-4993599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4993641-4993725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4993641 -4993725 bp Feature: gene Location: 4994522-4995681 bp Feature: domain Description: InsQ Location: 4994525-4995491 bp Feature: domain Description: InsQ Location: 4994525-4995491 bp Feature: gene Location: 4996249-4997757 bp Ori: AOY84753.1 Feature: domain Description: TPR Location: 4996312-4996528 bp Feature: domain Description: TPR Location: 499631 2-4996528 bp Feature: domain Description: TPR Location: 4996561-4996828 bp Feature: domain Description: TPR Location: 4996561 -4996828 bp Feature: domain Description: TPR Location: 4996927-4997152 bp Feature: domain Description: TPR Location: 4996927-49971 52 bp Feature: domain Description: TPR Location: 4997179-4997458 bp Feature: domain Description: TPR Location: 49971 79-4997458 bp Feature: domain Description: TPR Location: 4997506-4997701 bp Feature: domain Description: TPR Location: 4997506-4997701 bp Feature: gene Location: 5483208-5483602 bp Feature: gene Location: 5483690-5484082 bp Feature: domain Description: InsQ Location: 5483723-5484068 bp Feature: domain Description: InsQ Location: 5483723-5484068 bp Feature: gene Location: 5484633-5486147 bp Ori: AOY81917.1 Feature: domain Description: RVT_N Location: 5484672-5484915 bp Feature: domain Description: RVT_N Location: 5484672-548491 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5484969-5485389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5484969-5485389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5485398-5485563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5485398-5485563 bp Feature: domain Description: McrA Location: 5485800-5486118 bp Feature: domain Description: McrA Location: 5485800-54861 1 8 bp Feature: gene Location: 5486225-5486704 bp Feature: domain Description: InsQ Location: 5486279-5486657 bp Feature: domain Description: InsQ Location: 5486279-5486657 bp Feature: gene Location: 5488436-5489854 bp Feature: domain Description: RVT_N Location: 5488442-5488595 bp Feature: domain Description: RVT_N Location: 5488442-5488595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5488637-5489288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5488637-5489288 bp Feature: domain Description: GIIM Note: maturase Location: 5489372-5489600 bp Feature: domain Description: GIIM Note: maturase Location: 5489372-5489600 bp Feature: gene Location: 5490186-5490689 bp Feature: gene Location: 5490916-5491545 bp Ori: AOY81919.1 Feature: domain Description: YkuD_like Location: 5491171-5491540 bp Feature: domain Description: YkuD_like Location: 5491 1 71 -5491 540 bp Feature: gene Location: 5505797-5505940 bp Ori: AOY81927.1 Feature: domain Description: RHH_1 Location: 5505818-5505914 bp Feature: domain Description: RHH_1 Location: 550581 8-550591 4 bp Feature: gene Location: 5506081-5506320 bp Feature: gene Location: 5507071-5507367 bp Ori: AOY81929.1 Feature: domain Description: RVT_N Location: 5507077-5507230 bp Feature: domain Description: RVT_N Location: 5507077-5507230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5507272-5507356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5507272-5507356 bp Feature: gene Location: 5507688-5508685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5507691-5507928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5507691 -5507928 bp Feature: gene Location: 5509183-5509881 bp Feature: gene Location: 5510059-5510703 bp Ori: AOY81931.1 Feature: domain Description: PRK05920 Location: 5510068-5510665 bp Feature: domain Description: PRK05920 Location: 551 0068-551 0665 bp Feature: gene Location: 6195819-6196043 bp Feature: gene Location: 6196056-6196367 bp Ori: AOY82393.1 Feature: domain Description: GIIM Note: maturase Location: 6196092-6196179 bp Feature: domain Description: GIIM Note: maturase Location: 61 96092-61 961 79 bp Feature: gene Location: 6196560-6196883 bp Ori: AOY82394.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6196587-6196719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 96587-61 9671 9 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6196728-6196881 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 96728-61 96881 bp Feature: gene Location: 6197061-6197291 bp Ori: AOY82395.1 Feature: domain Description: RVT_N Location: 6197064-6197154 bp Feature: domain Description: RVT_N Location: 61 97064-61 971 54 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6197205-6197286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 97205-61 97286 bp Feature: gene Location: 6197492-6197734 bp Feature: gene Location: 6198713-6198814 bp Feature: gene Location: 6357665-6358462 bp Ori: AOY82494.1 Feature: domain Description: HflC Location: 6357686-6358406 bp Feature: domain Description: HflC Location: 6357686-6358406 bp Feature: gene Location: 6359156-6359761 bp Ori: AOY84856.1 Feature: domain Description: DUF4340 Location: 6359273-6359369 bp Feature: domain Description: DUF4340 Location: 6359273-6359369 bp Feature: domain Description: DUF4340 Location: 6359378-6359711 bp Feature: domain Description: DUF4340 Location: 6359378-635971 1 bp Feature: gene Location: 6360632-6361606 bp Ori: AOY82495.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6360635-6360872 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6360635-6360872 bp Feature: domain Description: GIIM Note: maturase Location: 6360959-6361184 bp Feature: domain Description: GIIM Note: maturase Location: 6360959-6361 1 84 bp Feature: domain Description: McrA Location: 6361280-6361568 bp Feature: domain Description: McrA Location: 6361 280-6361 568 bp Feature: gene Location: 6361590-6362219 bp Ori: AOY82496.1 Feature: domain Description: RVT_N Location: 6361596-6361749 bp Feature: domain Description: RVT_N Location: 6361 596-6361 749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6361791-6362175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6361 791 -63621 75 bp Feature: gene Location: 6363037-6363969 bp Feature: domain Description: InsQ Location: 6363040-6363970 bp Feature: domain Description: InsQ Location: 6363040-6363970 bp Feature: gene Location: 6364209-6364436 bp Ori: AOY82497.1 Feature: domain Description: Methyltransf_11 Location: 6364212-6364404 bp Feature: domain Description: Methyltransf_1 1 Location: 636421 2-6364404 bp Feature: gene Location: 6529926-6530126 bp Feature: gene Location: 6530794-6531069 bp Feature: gene Location: 6532680-6533117 bp Ori: AOY82614.1 Feature: domain Description: RVT_N Location: 6532716-6532962 bp Feature: domain Description: RVT_N Location: 653271 6-6532962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6533004-6533088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6533004-6533088 bp Feature: gene Location: 6533416-6534403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6533419-6533656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 653341 9-6533656 bp Feature: domain Description: GIIM Note: maturase Location: 6533740-6533878 bp Feature: domain Description: GIIM Note: maturase Location: 6533740-6533878 bp Feature: gene Location: 6535056-6535604 bp Feature: gene Location: 6535609-6535958 bp Feature: gene Location: 7566840-7567259 bp Ori: AOY83288.1 Feature: domain Description: Y1_Tnp Location: 7566879-7567245 bp Feature: domain Description: Y1 _Tnp Location: 7566879-7567245 bp Feature: gene Location: 7567312-7568103 bp Feature: gene Location: 7568681-7570237 bp Feature: domain Description: RVT_N Location: 7568726-7568972 bp Feature: domain Description: RVT_N Location: 7568726-7568972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7569014-7569665 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 756901 4-7569665 bp Feature: domain Description: GIIM Note: maturase Location: 7569749-7569977 bp Feature: domain Description: GIIM Note: maturase Location: 7569749-7569977 bp Feature: gene Location: 7570482-7571450 bp Ori: AOY83289.1 Feature: domain Description: KOG1238 Location: 7570590-7570896 bp Feature: domain Description: KOG1 238 Location: 7570590-7570896 bp Feature: gene Location: 7571485-7572000 bp Ori: AOY83290.1 Feature: domain Description: CFF1 Location: 7571494-7571992 bp Feature: domain Description: CFF1 Location: 7571 494-7571 992 bp Feature: gene Location: 7598863-7599282 bp Feature: domain Description: DUF4096 Location: 7598920-7599130 bp Feature: domain Description: DUF4096 Location: 7598920-75991 30 bp Feature: gene Location: 7599337-7600028 bp Feature: domain Description: tspaseT_teng_C Location: 7599550-7599769 bp Feature: domain Description: tspaseT_teng_C Location: 7599550-7599769 bp Feature: gene Location: 7600169-7601912 bp Feature: domain Description: RVT_N Location: 7600232-7600475 bp Feature: domain Description: RVT_N Location: 7600232-7600475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7600517-7600904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 760051 7-7600904 bp Feature: gene Location: 7602565-7603558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7602568-7602823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7602568-7602823 bp Feature: domain Description: GIIM Note: maturase Location: 7602901-7603135 bp Feature: domain Description: GIIM Note: maturase Location: 7602901 -76031 35 bp Feature: gene Location: 7603542-7604303 bp Ori: AOY83302.1 Feature: domain Description: RVT_N Location: 7603587-7603833 bp Feature: domain Description: RVT_N Location: 7603587-7603833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7603875-7604262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7603875-7604262 bp Feature: gene Location: 7604710-7604991 bp Feature: gene Location: 7606083-7606838 bp Feature: gene Location: 7847576-7850608 bp Ori: AOY83433.1 Feature: domain Description: PRK13837 Location: 7847615-7848401 bp Feature: domain Description: PRK1 3837 Location: 784761 5-7848401 bp Feature: domain Description: glnL Location: 7848431-7848578 bp Feature: domain Description: glnL Location: 7848431 -7848578 bp Feature: domain Description: TMAO_torS Location: 7848740-7849331 bp Feature: domain Description: TMAO_torS Location: 7848740-7849331 bp Feature: domain Description: TMAO_torS Location: 7849676-7850405 bp Feature: domain Description: TMAO_torS Location: 7849676-7850405 bp Feature: gene Location: 7850605-7851915 bp Ori: AOY83434.1 Feature: domain Description: TMAO_torS Location: 7850641-7851040 bp Feature: domain Description: TMAO_torS Location: 7850641 -7851 040 bp Feature: domain Description: COG4251 Location: 7851046-7851574 bp Feature: domain Description: COG4251 Location: 7851 046-7851 574 bp Feature: domain Description: COG4251 Location: 7851673-7851910 bp Feature: domain Description: COG4251 Location: 7851 673-7851 91 0 bp Feature: gene Location: 7852665-7853651 bp Ori: AOY83435.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7852668-7852905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7852668-7852905 bp Feature: domain Description: GIIM Note: maturase Location: 7852983-7853217 bp Feature: domain Description: GIIM Note: maturase Location: 7852983-785321 7 bp Feature: domain Description: McrA Location: 7853292-7853601 bp Feature: domain Description: McrA Location: 7853292-7853601 bp Feature: gene Location: 7853623-7854396 bp Ori: AOY83436.1 Feature: domain Description: RVT_N Location: 7853668-7853914 bp Feature: domain Description: RVT_N Location: 7853668-785391 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7853956-7854340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7853956-7854340 bp Feature: gene Location: 7854983-7856480 bp Feature: domain Description: InsQ Location: 7855433-7856294 bp Feature: domain Description: InsQ Location: 7855433-7856294 bp Feature: gene Location: 7856512-7857105 bp Ori: AOY83437.1 Feature: domain Description: COG2452 Location: 7856521-7857073 bp Feature: domain Description: COG2452 Location: 7856521 -7857073 bp Feature: gene Location: 9145641-9146654 bp Ori: AOY84280.1 Feature: domain Description: TilS Location: 9145665-9146541 bp Feature: domain Description: TilS Location: 91 45665-91 46541 bp Feature: gene Location: 9146895-9148016 bp Ori: AOY84281.1 Feature: domain Description: InsQ Location: 9146901-9147987 bp Feature: domain Description: InsQ Location: 91 46901 -91 47987 bp Feature: gene Location: 9148593-9150116 bp Ori: AOY85038.1 Feature: domain Description: RVT_N Location: 9148632-9148878 bp Feature: domain Description: RVT_N Location: 91 48632-91 48878 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9148929-9149349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 48929-91 49349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9149358-9149523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 49358-91 49523 bp Feature: domain Description: GIIM Note: maturase Location: 9149583-9149724 bp Feature: domain Description: GIIM Note: maturase Location: 91 49583-91 49724 bp Feature: domain Description: McrA Location: 9149841-9150078 bp Feature: domain Description: McrA Location: 91 49841 -91 50078 bp Feature: gene Location: 9150893-9151446 bp Feature: domain Description: RVT_N Location: 9150917-9151163 bp Feature: domain Description: RVT_N Location: 91 5091 7-91 51 1 63 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9151214-9151445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 51 21 4-91 51 445 bp Feature: gene Location: 9151748-9153628 bp Ori: AOY84282.1 Feature: domain Description: PRK13981 Location: 9151751-9153623 bp Feature: domain Description: PRK1 3981 Location: 91 51 751 -91 53623 bp Feature: gene Location: 9154089-9154271 bp Feature: gene Location: 9262046-9262312 bp Feature: gene Location: 9262384-9263046 bp Feature: domain Description: InsQ Location: 9262396-9262933 bp Feature: domain Description: InsQ Location: 9262396-9262933 bp Feature: gene Location: 9263898-9265596 bp Feature: domain Description: RVT_N Location: 9263943-9264189 bp Feature: domain Description: RVT_N Location: 9263943-92641 89 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9264231-9264618 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9264231 -926461 8 bp Feature: gene Location: 9267319-9268218 bp Feature: gene Location: 9268364-9268678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11728 (L-2-hydroxyglutarate oxidase), Methyltransf_23 (pfam13489), Methyltransf_14 (pfam08484), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), InsQ (COG0675), COG2452 (Predicted site-specific integrase-resolvase ), Snapin_Pallidin (pfam14712)
crypto_DASH (TIGR02765), Y1_Tnp (pfam01797), STKc_PknB_like (cd14014), COG3899 (Predicted ATPase ), GAF (smart00065), TMAO_torS (TIGR02956), PRK09294 (phthiocerol/phthiodiolone dimycocerosyl transferase), FAAL (cd05931), HTH_MerR-trunc (cd04762), XisI (pfam08869)
pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), HAD (pfam12710), PLN02591 (tryptophan synthase), AcpP (COG0236), HTH_17 (pfam12728), group_II_RT_mat (TIGR04416), HNHc (smart00507), FhaB (COG3210), RVT-Retrons, XisH (pfam08814)
YhhI (COG5433), PPC (pfam04151), TPR (smart00028), YkuD_like (cl21614), RHH_1 (pfam01402), PRK05920 (aromatic acid decarboxylase; Validated), HflC (COG0330), DUF4340 (pfam14238), Methyltransf_11 (pfam08241), KOG1238 (KOG1238, Glucose dehydrogenase/choline dehydrogenase/mandelonitrile lyase (GMC oxidoreductase family) )
CFF1 (COG3542), DUF4096 (pfam13340), tspaseT_teng_C (TIGR01766), PRK13837 (two-component system VirA-like sensor kinase), glnL (PRK11073), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), TilS (pfam09179), PRK13981 (NAD synthetase; Provisional)