myRT

myRT report for GCA_001854795.1_ASM185479v1

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Seq: MDDU01000001.1 Mesorhizobium sp. LCM 4577 contig_0, whole genome shotgun sequence (954172 bp)
Overview 1 RT 1: 197495-206792 bp Neighborhood of RT #1 [197495, 206839] SIR2_2 YeeA YeeA RVT-UG11 YifB Beta-lactamase Feature: gene Location: 197495-198532 bp Ori: OHV70775.1 Feature: domain Description: SIR2_2 Location: 197888-198311 bp Feature: domain Description: SIR2_2 Location: 1 97888-1 9831 1 bp Feature: gene Location: 199043-201955 bp Ori: OHV70776.1 Feature: domain Description: YeeA Location: 199214-200186 bp Feature: domain Description: YeeA Location: 1 9921 4-2001 86 bp Feature: domain Description: YeeA Location: 200384-200816 bp Feature: domain Description: YeeA Location: 200384-20081 6 bp Feature: gene Location: 203133-203900 bp Ori: OHV70777.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 203271-203706 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 203271 -203706 bp Feature: gene Location: 204130-205569 bp Feature: domain Description: YifB Location: 204133-205549 bp Feature: domain Description: YifB Location: 2041 33-205549 bp Feature: gene Location: 205607-206839 bp Ori: OHV71404.1 Feature: domain Description: Beta-lactamase Location: 205685-206792 bp Feature: domain Description: Beta-lactamase Location: 205685-206792 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YeeA (COG1002), RVT-UG11, YifB (COG0606), Beta-lactamase (pfam00144)

Seq: MDDU01000032.1 Mesorhizobium sp. LCM 4577 contig_37, whole genome shotgun sequence (11185 bp)
Overview 1 RT 1: 4664-11112 bp Neighborhood of RT #1 [4664, 11111] CsdA M20_ArgE RVT-GII GIIM RVT-GII GIIM RVT-GII RVT-GII Feature: gene Location: 4664-5857 bp Ori: OHV62884.1 Feature: domain Description: CsdA Location: 4694-5831 bp Feature: domain Description: CsdA Location: 4694-5831 bp Feature: gene Location: 5896-7041 bp Ori: OHV62885.1 Feature: domain Description: M20_ArgE Location: 5926-7030 bp Feature: domain Description: M2 0_ArgE Location: 592 6-7030 bp Feature: gene Location: 7261-7902 bp Ori: OHV62886.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7333-7474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7333-7474 bp Feature: domain Description: GIIM Note: maturase Location: 7522-7750 bp Feature: domain Description: GIIM Note: maturase Location: 752 2 -7750 bp Feature: gene Location: 7899-8534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7905-8136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7905-8136 bp Feature: domain Description: GIIM Note: maturase Location: 8214-8436 bp Feature: domain Description: GIIM Note: maturase Location: 82 14-8436 bp Feature: gene Location: 8715-10010 bp Ori: OHV62887.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8970-9663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8970-9663 bp Feature: gene Location: 10530-11111 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10695-11112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10695-11112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CsdA (COG0520), M20_ArgE (cd03894), RVT-GII, GIIM (pfam08388)

Seq: MDDU01000014.1 Mesorhizobium sp. LCM 4577 contig_20, whole genome shotgun sequence (108717 bp)
Overview 1 RT 1: 1-4859 bp Neighborhood of RT #1 [1, 5160] PRK06526 RVT-GII Phage_int_SAM_4 INT_IntI_C Zn_Tnp_IS91 Feature: gene Location: 1-791 bp Feature: gene Location: 791-1648 bp Ori: OHV65802.1 Feature: domain Description: PRK06526 Location: 869-1553 bp Feature: domain Description: PRK06526 Location: 869-1553 bp Feature: gene Location: 2319-2975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511-2976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511-2976 bp Feature: gene Location: 3701-4561 bp Ori: OHV65803.1 Feature: domain Description: Phage_int_SAM_4 Location: 3722-3947 bp Feature: domain Description: Phage_int_SAM_4 Location: 3 722-3 947 bp Feature: domain Description: INT_IntI_C Location: 4001-4490 bp Feature: domain Description: INT_IntI_C Location: 4001-4490 bp Feature: gene Location: 4574-5160 bp Feature: domain Description: Zn_Tnp_IS91 Location: 4604-4859 bp Feature: domain Description: Zn_Tnp_IS91 Location: 4604-4859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06526 (transposase; Provisional), RVT-GII, Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193), Zn_Tnp_IS91 (pfam14319)