myRT

myRT report for GCA_001854865.1_ASM185486v1

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Seq: MDDW01000008.1 Rhizobium sp. LCM 4573 contig_15, whole genome shotgun sequence (144562 bp)
Overview 1 RT 1: 31302-36632 bp Neighborhood of RT #1 [31302, 36658] AbiEii RVT-GII GIIM AbiEii PepP Feature: gene Location: 31302-31895 bp Feature: gene Location: 31885-32112 bp Feature: domain Description: AbiEii Location: 32005-32101 bp Feature: domain Description: AbiEii Location: 32005-321 01 bp Feature: gene Location: 32717-34228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33017-33776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3301 7-33776 bp Feature: domain Description: GIIM Note: maturase Location: 33851-34073 bp Feature: domain Description: GIIM Note: maturase Location: 33851 -34073 bp Feature: gene Location: 34314-35036 bp Feature: domain Description: AbiEii Location: 34365-35010 bp Feature: domain Description: AbiEii Location: 34365-3501 0 bp Feature: gene Location: 35531-36658 bp Feature: domain Description: PepP Location: 35537-36632 bp Feature: domain Description: PepP Location: 35537-36632 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-GII, GIIM (pfam08388), PepP (COG0006)

Seq: MDDW01000014.1 Rhizobium sp. LCM 4573 contig_20, whole genome shotgun sequence (49604 bp)
Overview 1 RT 1: 16473-22111 bp Neighborhood of RT #1 [16473, 22116] PHA02517 PRK02406 RVT_N RVT-GII GIIM COG4544 Feature: gene Location: 16473-17327 bp Feature: domain Description: PHA02517 Location: 16539-17316 bp Feature: domain Description: PHA02 517 Location: 16539-17316 bp Feature: gene Location: 17595-18629 bp Feature: domain Description: PRK02406 Location: 17598-18591 bp Feature: domain Description: PRK02 406 Location: 17598-18591 bp Feature: gene Location: 18715-20235 bp Feature: RT Description: RVT_N Location: 18724-18937 bp Feature: RT Description: RVT_N Location: 1872 4-18937 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19021-19783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1902 1-19783 bp Feature: domain Description: GIIM Note: maturase Location: 19855-20122 bp Feature: domain Description: GIIM Note: maturase Location: 19855-2 012 2 bp Feature: gene Location: 20990-21217 bp Feature: gene Location: 21361-22116 bp Feature: domain Description: COG4544 Location: 21382-22111 bp Feature: domain Description: COG4544 Location: 2 1382 -2 2 111 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PRK02406 (DNA polymerase IV; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4544 (Uncharacterized conserved protein )