myRT

myRT report for GCA_001858125.1_ASM185812v1

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Seq: MBQY01000076.1 Cylindrospermopsis raciborskii MVCC14 CYLMVCC14_contig78, whole genome shotgun sequence (60909 bp)
Overview 1 RT 1: 7309-12605 bp Neighborhood of RT #1 [7309, 12613] N_methyl Pilin_GH KOG0404 RVT_N RVT-GII GIIM KOG0404 TRX_NTR DppC Feature: gene Location: 7309-7833 bp Feature: domain Description: N_methyl Location: 7369-7438 bp Feature: domain Description: N_methyl Location: 7369-7438 bp Feature: domain Description: Pilin_GH Location: 7474-7801 bp Feature: domain Description: Pilin_GH Location: 7474-7801 bp Feature: gene Location: 8047-8235 bp Feature: domain Description: KOG0404 Location: 8077-8224 bp Feature: domain Description: KOG0404 Location: 8077-8224 bp Feature: gene Location: 8871-10337 bp Feature: RT Description: RVT_N Location: 8955-9138 bp Feature: RT Description: RVT_N Location: 8955-91 38 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9219-9843 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 921 9-9843 bp Feature: domain Description: GIIM Note: maturase Location: 9987-10212 bp Feature: domain Description: GIIM Note: maturase Location: 9987-1 021 2 bp Feature: gene Location: 10543-11697 bp Feature: domain Description: KOG0404 Location: 10546-11278 bp Feature: domain Description: KOG0404 Location: 1 0546-1 1 278 bp Feature: domain Description: TRX_NTR Location: 11398-11683 bp Feature: domain Description: TRX_NTR Location: 1 1 398-1 1 683 bp Feature: gene Location: 11753-12613 bp Feature: domain Description: DppC Location: 11789-12605 bp Feature: domain Description: DppC Location: 1 1 789-1 2605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0404 (KOG0404, Thioredoxin reductase ), TRX_NTR (cd02949), DppC (COG1173), N_methyl (pfam07963), Pilin_GH (pfam16734), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: MBQY01000016.1 Cylindrospermopsis raciborskii MVCC14 CYLMVCC14_contig23, whole genome shotgun sequence (227076 bp)
Overview 1 RT 1: 152923-156417 bp 2 RT 2: 192331-198215 bp Neighborhood of RT #1 [152923, 156434] cyt_b559_alpha CpeS RVT_N RVT-GII GIIM CpeS HEAT Neighborhood of RT #2 [192331, 198229] RNR_II_monomer YkfC RVT-GII GIIM RTPR DUF3598 Feature: gene Location: 152923-153171 bp Feature: domain Description: cyt_b559_alpha Location: 152929-153160 bp Feature: domain Description: cyt_b559_alpha Location: 152 92 9-153160 bp Feature: gene Location: 153325-153579 bp Feature: domain Description: CpeS Location: 153328-153526 bp Feature: domain Description: CpeS Location: 15332 8-15352 6 bp Feature: gene Location: 153742-154863 bp Feature: RT Description: RVT_N Location: 153778-153949 bp Feature: RT Description: RVT_N Location: 153778-153949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153967-154483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153967-154483 bp Feature: domain Description: GIIM Note: maturase Location: 154543-154735 bp Feature: domain Description: GIIM Note: maturase Location: 154543-154735 bp Feature: gene Location: 155386-155652 bp Feature: domain Description: CpeS Location: 155392-155620 bp Feature: domain Description: CpeS Location: 155392 -15562 0 bp Feature: gene Location: 155769-156434 bp Feature: domain Description: HEAT Location: 155781-156417 bp Feature: domain Description: HEAT Location: 155781-156417 bp Feature: gene Location: 192331-192942 bp Feature: gene Location: 193086-193349 bp Feature: domain Description: RNR_II_monomer Location: 193149-193344 bp Feature: domain Description: RNR_II_monomer Location: 193149-193344 bp Feature: gene Location: 193971-195212 bp Feature: domain Description: YkfC Location: 193989-194145 bp Feature: domain Description: YkfC Location: 193989-194145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194148-194754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 194148-194754 bp Feature: domain Description: GIIM Note: maturase Location: 194835-195069 bp Feature: domain Description: GIIM Note: maturase Location: 194835-195069 bp Feature: gene Location: 195393-197351 bp Feature: domain Description: RTPR Location: 195396-197325 bp Feature: domain Description: RTPR Location: 195396-19732 5 bp Feature: gene Location: 197375-198229 bp Feature: domain Description: DUF3598 Location: 197384-198215 bp Feature: domain Description: DUF3598 Location: 197384-1982 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT cyt_b559_alpha (TIGR01332), CpeS (pfam09367), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HEAT (sd00044), RNR_II_monomer (cd01676), YkfC (COG3344), RTPR (TIGR02505), DUF3598 (pfam12204)

Seq: MBQY01000001.1 Cylindrospermopsis raciborskii MVCC14 CYLMVCC14_contig1, whole genome shotgun sequence (299478 bp)
Overview 1 RT 1: 215454-222008 bp Neighborhood of RT #1 [215454, 222070] TlyC DUF3157 RVT_N RVT-GII GIIM QueC MviM Feature: gene Location: 215454-216836 bp Feature: domain Description: TlyC Location: 215493-216822 bp Feature: domain Description: TlyC Location: 215493 -216822 bp Feature: gene Location: 216932-217636 bp Feature: domain Description: DUF3157 Location: 217313-217463 bp Feature: domain Description: DUF3 157 Location: 2173 13 -217463 bp Feature: gene Location: 218302-219978 bp Feature: RT Description: RVT_N Location: 218329-218557 bp Feature: RT Description: RVT_N Location: 2183 29-218557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218593-219253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218593 -219253 bp Feature: domain Description: GIIM Note: maturase Location: 219355-219586 bp Feature: domain Description: GIIM Note: maturase Location: 2193 55-219586 bp Feature: gene Location: 220111-220791 bp Feature: domain Description: QueC Location: 220114-220777 bp Feature: domain Description: QueC Location: 220114-220777 bp Feature: gene Location: 220991-222070 bp Feature: domain Description: MviM Location: 221057-222008 bp Feature: domain Description: MviM Location: 221057-222008 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TlyC (COG1253), DUF3157 (pfam11355), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), QueC (pfam06508), MviM (COG0673)