myRT

myRT report for GCA_001866005.1_ASM186600v1

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Seq: MLQR01000029.1 Anaerobacillus alkalilacustris strain DSM 18345 Ga0137925_130, whole genome shotgun sequence (391788 bp)
Overview 1 RT 1: 161546-171111 bp Neighborhood of RT #1 [161546, 171131] RimP polC RVT-GII HNHc polC PRK09194 Feature: gene Location: 161546-162016 bp Ori: OIJ13127.1 Feature: domain Description: RimP Location: 161549-162011 bp Feature: domain Description: RimP Location: 1 61 549-1 6201 1 bp Feature: gene Location: 162364-163815 bp Gene: polC Feature: domain Description: polC Location: 162415-163813 bp Feature: domain Description: polC Location: 1 6241 5-1 6381 3 bp Feature: gene Location: 163880-165703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164186-164882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 641 86-1 64882 bp Feature: domain Description: HNHc Note: nucleases Location: 165437-165587 bp Feature: domain Description: HNHc Note: nucleases Location: 1 65437-1 65587 bp Feature: gene Location: 166430-169336 bp Feature: domain Description: polC Location: 166457-169331 bp Feature: domain Description: polC Location: 1 66457-1 69331 bp Feature: gene Location: 169422-171131 bp Ori: OIJ13128.1 Feature: domain Description: PRK09194 Location: 169425-171111 bp Feature: domain Description: PRK091 94 Location: 1 69425-1 71 1 1 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RimP (COG0779), polC (TIGR00354), RVT-GII, HNHc (smart00507), PRK09194 (prolyl-tRNA synthetase; Provisional)

Seq: MLQR01000010.1 Anaerobacillus alkalilacustris strain DSM 18345 Ga0137925_110, whole genome shotgun sequence (17557 bp)
Overview 1 RT 1: 3093-9876 bp Neighborhood of RT #1 [3093, 9893] RVT-GII OsmC RVT-GII HNHc PRK00124 Feature: gene Location: 3093-3380 bp Feature: gene Location: 3447-3686 bp Feature: gene Location: 3852-5621 bp Ori: OIJ16356.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4110-4803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4110-4803 bp Feature: gene Location: 7183-7635 bp Ori: OIJ16348.1 Feature: domain Description: OsmC Location: 7306-7618 bp Feature: domain Description: OsmC Location: 7306-7618 bp Feature: gene Location: 7922-8905 bp Ori: OIJ16349.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7928-8108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792 8-8108 bp Feature: domain Description: HNHc Note: nucleases Location: 8666-8804 bp Feature: domain Description: HNHc Note: nucleases Location: 8666-8804 bp Feature: gene Location: 9219-9410 bp Feature: gene Location: 9441-9893 bp Ori: OIJ16351.1 Feature: domain Description: PRK00124 Location: 9444-9876 bp Feature: domain Description: PRK0012 4 Location: 9444-9876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, OsmC (pfam02566), HNHc (smart00507), PRK00124 (YaiI/YqxD family protein)

Seq: MLQR01000049.1 Anaerobacillus alkalilacustris strain DSM 18345 Ga0137925_151, whole genome shotgun sequence (65903 bp)
Overview 1 RT 1: 8859-14126 bp Neighborhood of RT #1 [8859, 14686] INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII GIIM Npp1 Feature: gene Location: 8859-9821 bp Ori: OIJ10701.1 Feature: domain Description: INT_RitB_C_like Location: 9192-9753 bp Feature: domain Description: INT_RitB_C_like Location: 9192-9753 bp Feature: gene Location: 9815-10858 bp Ori: OIJ10702.1 Feature: domain Description: Phage_int_SAM_1 Location: 9875-10112 bp Feature: domain Description: Phage_int_SAM_1 Location: 9875-10112 bp Feature: domain Description: INT_RitC_C_like Location: 10208-10766 bp Feature: domain Description: INT_RitC_C_like Location: 10208-10766 bp Feature: gene Location: 11035-12267 bp Ori: OIJ10761.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11209-11830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11209-1183 0 bp Feature: domain Description: GIIM Note: maturase Location: 11875-12109 bp Feature: domain Description: GIIM Note: maturase Location: 11875-12109 bp Feature: gene Location: 12400-12684 bp Feature: gene Location: 13118-14686 bp Ori: OIJ10704.1 Feature: domain Description: Npp1 Location: 13226-14126 bp Feature: domain Description: Npp1 Location: 13 226-14126 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, GIIM (pfam08388), Npp1 (COG1524)

Seq: MLQR01000027.1 Anaerobacillus alkalilacustris strain DSM 18345 Ga0137925_128, whole genome shotgun sequence (209192 bp)
Overview 1 RT 1: 48440-53023 bp Neighborhood of RT #1 [48440, 53025] YhjR YhjR Fur_reg_FbpB RVT-CRISPR-like LPLAT_AGPAT-like PRK14420 Feature: gene Location: 48440-48943 bp Ori: OIJ13574.1 Feature: domain Description: YhjR Location: 48554-48710 bp Feature: domain Description: YhjR Location: 4 8554 -4 8710 bp Feature: domain Description: YhjR Location: 48761-48890 bp Feature: domain Description: YhjR Location: 4 8761-4 8890 bp Feature: gene Location: 49402-49548 bp Ori: OIJ13575.1 Feature: domain Description: Fur_reg_FbpB Location: 49408-49519 bp Feature: domain Description: Fur_reg_FbpB Location: 4 94 08-4 9519 bp Feature: gene Location: 49625-51065 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 49853-50198 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 4 9853-50198 bp Feature: gene Location: 51900-52619 bp Ori: OIJ13576.1 Feature: domain Description: LPLAT_AGPAT-like Location: 52053-52587 bp Feature: domain Description: LPLAT_AGPAT-like Location: 52053-52587 bp Feature: gene Location: 52753-53025 bp Ori: OIJ13577.1 Feature: domain Description: PRK14420 Location: 52759-53023 bp Feature: domain Description: PRK14 4 20 Location: 52759-53023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhjR (COG1633), Fur_reg_FbpB (pfam13040), RVT-CRISPR, LPLAT_AGPAT-like (cd07989), PRK14420 (acylphosphatase; Provisional)

Seq: MLQR01000047.1 Anaerobacillus alkalilacustris strain DSM 18345 Ga0137925_149, whole genome shotgun sequence (11659 bp)
Overview 1 RT 1: 2386-10358 bp Neighborhood of RT #1 [2386, 11160] RVT-GII AcrB ManA Feature: gene Location: 2386-2661 bp Feature: gene Location: 2801-3307 bp Feature: gene Location: 3478-5247 bp Ori: OIJ10862.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736-4429 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3736-4429 bp Feature: gene Location: 7040-10093 bp Ori: OIJ10861.1 Feature: domain Description: AcrB Location: 7052-10019 bp Feature: domain Description: AcrB Location: 705 2-10019 bp Feature: gene Location: 10214-11160 bp Feature: domain Description: ManA Location: 10223-10358 bp Feature: domain Description: ManA Location: 10223-1035 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, AcrB (COG0841), ManA (COG1482)