myRT

myRT report for GCA_001866075.1_ASM186607v1

Download annotations/find similar RTs

Seq: LQXD01000024.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1024, whole genome shotgun sequence (12409 bp)
Overview 1 RT 1: 7693-12042 bp Neighborhood of RT #1 [7693, 12042] Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 7693-7950 bp Feature: gene Location: 8345-9334 bp Feature: domain Description: Phage_int_SAM_1 Location: 8366-8609 bp Feature: domain Description: Phage_int_SAM_1 Location: 8366-8609 bp Feature: domain Description: INT_RitC_C_like Location: 8699-9251 bp Feature: domain Description: INT_RitC_C_like Location: 8699-9251 bp Feature: gene Location: 9451-10026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9649-10027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9649-1 0027 bp Feature: gene Location: 10626-10994 bp Feature: gene Location: 11326-12042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII

Seq: LQXD01000156.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1156, whole genome shotgun sequence (16795 bp)
Overview 1 RT 1: 14478-16500 bp Neighborhood of RT #1 [14478, 16499] XerD RVT-GII Feature: gene Location: 14478-14735 bp Feature: gene Location: 15090-15807 bp Feature: domain Description: XerD Location: 15099-15342 bp Feature: domain Description: XerD Location: 15099-15342 bp Feature: gene Location: 15924-16499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16122-16500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612 2 -16500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XerD (COG4974), RVT-GII

Seq: LQXD01000057.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1057, whole genome shotgun sequence (130013 bp)
Overview 1 RT 1: 125970-129757 bp Neighborhood of RT #1 [125970, 129870] RVT-GII HNHc Feature: gene Location: 125970-126191 bp Feature: gene Location: 126490-127095 bp Feature: gene Location: 128074-129870 bp Ori: OIJ21180.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 128365-129064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1283 65-129064 bp Feature: domain Description: HNHc Note: nucleases Location: 129622-129757 bp Feature: domain Description: HNHc Note: nucleases Location: 129622-129757 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LQXD01000083.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1083, whole genome shotgun sequence (76341 bp)
Overview 1 RT 1: 58585-63930 bp 2 RT 2: 67229-71121 bp Neighborhood of RT #1 [58585, 63998] SseA RVT-GII KOG1005 CcmH Neighborhood of RT #2 [67229, 71183] RVT-GII GIIM xerS INT_RitA_C_like INT_RitB_C_like Feature: gene Location: 58585-59052 bp Feature: gene Location: 59064-59972 bp Ori: OIJ19131.1 Feature: domain Description: SseA Location: 59169-59964 bp Feature: domain Description: SseA Location: 59169-59964 bp Feature: gene Location: 60327-61655 bp Ori: OIJ19114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60582-61275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 60582-61275 bp Feature: domain Description: KOG1005 Location: 61389-61557 bp Feature: domain Description: KOG1005 Location: 61389-61557 bp Feature: gene Location: 62555-63280 bp Feature: gene Location: 63507-63998 bp Ori: OIJ19116.1 Feature: domain Description: CcmH Location: 63696-63930 bp Feature: domain Description: CcmH Location: 63696-63930 bp Feature: gene Location: 67229-67456 bp Feature: gene Location: 67572-67991 bp Feature: gene Location: 68141-68830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68144-68387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6814 4 -68387 bp Feature: domain Description: GIIM Note: maturase Location: 68435-68642 bp Feature: domain Description: GIIM Note: maturase Location: 684 35-6864 2 bp Feature: gene Location: 68969-70204 bp Ori: OIJ19119.1 Feature: domain Description: xerS Location: 69326-69545 bp Feature: domain Description: xerS Location: 69326-6954 5 bp Feature: domain Description: INT_RitA_C_like Location: 69638-70172 bp Feature: domain Description: INT_RitA_C_like Location: 69638-70172 bp Feature: gene Location: 70197-71183 bp Ori: OIJ19120.1 Feature: domain Description: INT_RitB_C_like Location: 70533-71121 bp Feature: domain Description: INT_RitB_C_like Location: 70533-71121 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SseA (COG2897), RVT-GII, KOG1005 (KOG1005, Telomerase catalytic subunit/reverse transcriptase TERT ), CcmH (pfam03918), GIIM (pfam08388), xerS (PRK05084), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797)

Seq: LQXD01000047.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1047, whole genome shotgun sequence (2847 bp)
Overview 1 RT 1: 902-1985 bp Neighborhood of RT #1 [902, 2176] RVT-GII GIIM Feature: gene Location: 902-2176 bp Ori: OIJ22582.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1103-1718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1103-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1778-1985 bp Feature: domain Description: GIIM Note: maturase Location: 1778-1985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LQXD01000030.1 Anaerobacillus isosaccharinicus strain NB2006 Ga0137927_1030, whole genome shotgun sequence (9970 bp)
Overview 1 RT 1: 3887-8386 bp Neighborhood of RT #1 [3887, 8386] RVT-GII HNHc Feature: gene Location: 3887-4156 bp Feature: gene Location: 4288-4818 bp Feature: gene Location: 5177-6973 bp Ori: OIJ22751.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5468-6167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 546 8-6 16 7 bp Feature: domain Description: HNHc Note: nucleases Location: 6725-6860 bp Feature: domain Description: HNHc Note: nucleases Location: 6 725-6 86 0 bp Feature: gene Location: 7713-7973 bp Feature: gene Location: 8072-8386 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)