myRT

myRT report for GCA_001866075.2_ASM186607v2

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Seq: LQXD02000001.1 Anaerobacillus isosaccharinicus strain NB2006 scf7180000000006, whole genome shotgun sequence (5139793 bp)
Overview 1 RT 1: 1175176-1179995 bp 2 RT 2: 1882043-1888491 bp 3 RT 3: 3329224-3333704 bp 4 RT 4: 3370704-3376680 bp 5 RT 5: 4484415-4489110 bp 6 RT 6: 4493101-4496951 bp 7 RT 7: 4503351-4507450 bp Neighborhood of RT #1 [1175176, 1179995] Nudix_Hydrolase_8 Acetyltransf_1 RVT-GII HNHc Neighborhood of RT #2 [1882043, 1888491] DUF772 DDE_Tnp_1_6 RVT-GII GIIM DDE_Tnp_1 Neighborhood of RT #3 [3329224, 3333704] RVT-GII HNHc Neighborhood of RT #4 [3370704, 3376680] RVT-GII HNHc Neighborhood of RT #5 [4484415, 4489110] SseA RVT-GII KOG1005 YjcZ_2 Neighborhood of RT #6 [4493101, 4497013] RVT-GII GIIM xerS INT_RitA_C_like INT_RitB_C_like Neighborhood of RT #7 [4503351, 4507450] Phage_int_SAM_1 INT_RitC_C_like RVT-GII Feature: gene Location: 1175176-1175556 bp Ori: MBA5585038.1 Feature: domain Description: Nudix_Hydrolase_8 Location: 1175188-1175512 bp Feature: domain Description: Nudix_Hydrolase_8 Location: 1 1 751 88-1 1 7551 2 bp Feature: gene Location: 1175770-1176267 bp Ori: MBA5585039.1 Feature: domain Description: Acetyltransf_1 Location: 1175890-1176184 bp Feature: domain Description: Acetyltransf_1 Location: 1 1 75890-1 1 761 84 bp Feature: gene Location: 1176786-1178582 bp Ori: MBA5585040.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1177077-1177776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 77077-1 1 77776 bp Feature: domain Description: HNHc Note: nucleases Location: 1178334-1178469 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 78334-1 1 78469 bp Feature: gene Location: 1179322-1179582 bp Feature: gene Location: 1179681-1179995 bp Feature: gene Location: 1882043-1882222 bp Feature: gene Location: 1882359-1883711 bp Ori: MBA5585704.1 Feature: domain Description: DUF772 Location: 1882515-1882743 bp Feature: domain Description: DUF772 Location: 1 88251 5-1 882743 bp Feature: domain Description: DDE_Tnp_1_6 Location: 1883334-1883685 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 1 883334-1 883685 bp Feature: gene Location: 1884492-1885766 bp Ori: MBA5585705.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1884693-1885308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 884693-1 885308 bp Feature: domain Description: GIIM Note: maturase Location: 1885368-1885575 bp Feature: domain Description: GIIM Note: maturase Location: 1 885368-1 885575 bp Feature: gene Location: 1886315-1887814 bp Ori: MBA5585706.1 Feature: domain Description: DDE_Tnp_1 Location: 1886942-1887734 bp Feature: domain Description: DDE_Tnp_1 Location: 1 886942-1 887734 bp Feature: gene Location: 1888246-1888491 bp Feature: gene Location: 3329224-3329493 bp Feature: gene Location: 3329625-3330155 bp Feature: gene Location: 3330514-3332310 bp Ori: MBA5587119.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330805-3331504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3330805-3331 504 bp Feature: domain Description: HNHc Note: nucleases Location: 3332062-3332197 bp Feature: domain Description: HNHc Note: nucleases Location: 3332062-33321 97 bp Feature: gene Location: 3333085-3333285 bp Feature: gene Location: 3333435-3333704 bp Feature: gene Location: 3370704-3371063 bp Feature: gene Location: 3371196-3371651 bp Feature: gene Location: 3371866-3373662 bp Ori: MBA5587180.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3372157-3372856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33721 57-3372856 bp Feature: domain Description: HNHc Note: nucleases Location: 3373414-3373549 bp Feature: domain Description: HNHc Note: nucleases Location: 337341 4-3373549 bp Feature: gene Location: 3374402-3375007 bp Feature: gene Location: 3376024-3376680 bp Feature: gene Location: 4484415-4484882 bp Feature: gene Location: 4484894-4485817 bp Ori: MBA5588244.1 Feature: domain Description: SseA Location: 4485014-4485809 bp Feature: domain Description: SseA Location: 448501 4-4485809 bp Feature: gene Location: 4486157-4487485 bp Ori: MBA5588245.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4486412-4487105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448641 2-44871 05 bp Feature: domain Description: KOG1005 Location: 4487219-4487387 bp Feature: domain Description: KOG1 005 Location: 448721 9-4487387 bp Feature: gene Location: 4488075-4488170 bp Ori: MBA5588246.1 Feature: domain Description: YjcZ_2 Location: 4488099-4488162 bp Feature: domain Description: YjcZ_2 Location: 4488099-44881 62 bp Feature: gene Location: 4488385-4489110 bp Feature: gene Location: 4493101-4493286 bp Feature: gene Location: 4493402-4493821 bp Feature: gene Location: 4493971-4494627 bp Ori: MBA5588252.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4493977-4494184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4493977-44941 84 bp Feature: domain Description: GIIM Note: maturase Location: 4494232-4494439 bp Feature: domain Description: GIIM Note: maturase Location: 4494232-4494439 bp Feature: gene Location: 4494799-4496034 bp Ori: MBA5588253.1 Feature: domain Description: xerS Location: 4495156-4495375 bp Feature: domain Description: xerS Location: 44951 56-4495375 bp Feature: domain Description: INT_RitA_C_like Location: 4495468-4496002 bp Feature: domain Description: INT_RitA_C_like Location: 4495468-4496002 bp Feature: gene Location: 4496027-4497013 bp Ori: MBA5588254.1 Feature: domain Description: INT_RitB_C_like Location: 4496363-4496951 bp Feature: domain Description: INT_RitB_C_like Location: 4496363-4496951 bp Feature: gene Location: 4503351-4503608 bp Feature: gene Location: 4503753-4504742 bp Feature: domain Description: Phage_int_SAM_1 Location: 4503774-4504017 bp Feature: domain Description: Phage_int_SAM_1 Location: 4503774-450401 7 bp Feature: domain Description: INT_RitC_C_like Location: 4504107-4504659 bp Feature: domain Description: INT_RitC_C_like Location: 45041 07-4504659 bp Feature: gene Location: 4504859-4505434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4505057-4505435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4505057-4505435 bp Feature: gene Location: 4506034-4506402 bp Feature: gene Location: 4506701-4507450 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_8 (cd04665), Acetyltransf_1 (pfam00583), RVT-GII, HNHc (smart00507), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), GIIM (pfam08388), DDE_Tnp_1 (pfam01609), SseA (COG2897), KOG1005 (KOG1005, Telomerase catalytic subunit/reverse transcriptase TERT )
YjcZ_2, xerS (PRK05084), INT_RitA_C_like (cd01188), INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)