myRT

myRT report for GCA_001866785.1_ASM186678v1

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Seq: MOLX01000079.1 Klebsiella pneumoniae strain KP41 plasmid unnamed1 KP41_80, whole genome shotgun sequence (1759 bp)
Overview 1 RT 1: 59-1151 bp Neighborhood of RT #1 [59, 1543] RVT-GII Feature: gene Location: 59-1543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461-1151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 -1 1 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MOLX01000053.1 Klebsiella pneumoniae strain KP41 plasmid unnamed1 KP41_53, whole genome shotgun sequence (13822 bp)
Overview 1 RT 1: 7262-12159 bp Neighborhood of RT #1 [7262, 12896] DUF1380 RVT_N RVT-GII GIIM HNHc DUF3560 Feature: gene Location: 7262-7684 bp Feature: domain Description: DUF1380 Location: 7265-7559 bp Feature: domain Description: DUF1380 Location: 72 65-7559 bp Feature: gene Location: 7681-7872 bp Feature: gene Location: 8186-9853 bp Feature: RT Description: RVT_N Location: 8234-8471 bp Feature: RT Description: RVT_N Location: 82 34-8471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8522-9164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852 2 -9164 bp Feature: domain Description: GIIM Note: maturase Location: 9215-9449 bp Feature: domain Description: GIIM Note: maturase Location: 92 15-9449 bp Feature: domain Description: HNHc Note: nucleases Location: 9659-9818 bp Feature: domain Description: HNHc Note: nucleases Location: 9659-9818 bp Feature: gene Location: 11253-11483 bp Feature: gene Location: 11535-12896 bp Feature: domain Description: DUF3560 Location: 11802-12159 bp Feature: domain Description: DUF3560 Location: 11802 -12 159 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3560 (pfam12083), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: MOLX01000004.1 Klebsiella pneumoniae strain KP41 KP41_4, whole genome shotgun sequence (263688 bp)
Overview 1 RT 1: 17458-24960 bp Neighborhood of RT #1 [17458, 24995] STKc_PknB_like RVT-Retrons AAA_15 DUF4917 Feature: gene Location: 17458-18561 bp Feature: domain Description: STKc_PknB_like Location: 17590-18031 bp Feature: domain Description: STKc_PknB_like Location: 17590-1803 1 bp Feature: gene Location: 18631-18873 bp Feature: gene Location: 19120-20220 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19303-19831 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 193 03 -1983 1 bp Feature: gene Location: 20335-22581 bp Feature: domain Description: AAA_15 Location: 20338-21346 bp Feature: domain Description: AAA_15 Location: 203 3 8-213 46 bp Feature: gene Location: 23976-24995 bp Feature: domain Description: DUF4917 Location: 24036-24960 bp Feature: domain Description: DUF4917 Location: 2403 6-24960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), RVT-Retrons, AAA_15 (pfam13175), DUF4917 (pfam16263)