myRT

myRT report for GCA_001871355.1_ASM187135v1

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Seq: MNWY01000059.1 Zetaproteobacteria bacterium CG1_02_49_23 cg1_0.2_scaffold_4922_c, whole genome shotgun sequence (12618 bp)
Overview 1 RT 1: 5266-12207 bp Neighborhood of RT #1 [5266, 12212] COG2361 HTH_19 RVT-Retrons PRK10262 Mfd Feature: gene Location: 5266-5618 bp Feature: domain Description: COG2361 Location: 5293-5410 bp Feature: domain Description: COG2361 Location: 5293-541 0 bp Feature: gene Location: 6299-6619 bp Feature: domain Description: HTH_19 Location: 6311-6482 bp Feature: domain Description: HTH_1 9 Location: 631 1 -6482 bp Feature: gene Location: 6597-7502 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6762-7281 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6762-7281 bp Feature: gene Location: 7889-8824 bp Feature: domain Description: PRK10262 Location: 7892-8813 bp Feature: domain Description: PRK1 0262 Location: 7892-881 3 bp Feature: gene Location: 8880-12212 bp Feature: domain Description: Mfd Location: 8916-12207 bp Feature: domain Description: Mfd Location: 891 6-1 2207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2361 (Uncharacterized conserved protein, contains HEPN domain ), HTH_19 (pfam12844), RVT-Retrons, PRK10262 (thioredoxin reductase; Provisional), Mfd (COG1197)

Seq: MNWY01000104.1 Zetaproteobacteria bacterium CG1_02_49_23 cg1_0.2_scaffold_1043_c, whole genome shotgun sequence (56430 bp)
Overview 1 RT 1: 11938-26228 bp Neighborhood of RT #1 [11938, 26239] carB aspS RVT_N RVT-GII GIIM DUF4011 DEXXQc_SF1 DEXXQc_SF1 KOG1803 MTES_1575 HA HA HA HA Feature: gene Location: 11938-15171 bp Feature: domain Description: carB Location: 11941-15157 bp Feature: domain Description: carB Location: 11941-15157 bp Feature: gene Location: 15322-17109 bp Feature: domain Description: aspS Location: 15331-17089 bp Feature: domain Description: aspS Location: 15331-17089 bp Feature: gene Location: 17330-18661 bp Feature: RT Description: RVT_N Location: 17396-17639 bp Feature: RT Description: RVT_N Location: 17396-17639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17684-18296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17684-182 96 bp Feature: domain Description: GIIM Note: maturase Location: 18302-18416 bp Feature: domain Description: GIIM Note: maturase Location: 18302 -18416 bp Feature: gene Location: 19618-24882 bp Feature: domain Description: DUF4011 Location: 20794-21310 bp Feature: domain Description: DUF4011 Location: 2 0794-2 1310 bp Feature: domain Description: DEXXQc_SF1 Location: 21655-22036 bp Feature: domain Description: DEXXQc_SF1 Location: 2 1655-2 2 036 bp Feature: domain Description: DEXXQc_SF1 Location: 23122-23857 bp Feature: domain Description: DEXXQc_SF1 Location: 2 312 2 -2 3857 bp Feature: domain Description: KOG1803 Location: 23995-24382 bp Feature: domain Description: KOG1803 Location: 2 3995-2 4382 bp Feature: domain Description: MTES_1575 Location: 24535-24814 bp Feature: domain Description: MTES_1575 Location: 2 4535-2 4814 bp Feature: gene Location: 25424-26239 bp Feature: domain Description: HA Location: 25445-25619 bp Feature: domain Description: HA Location: 2 5445-2 5619 bp Feature: domain Description: HA Location: 25646-25823 bp Feature: domain Description: HA Location: 2 5646-2 582 3 bp Feature: domain Description: HA Location: 25841-26024 bp Feature: domain Description: HA Location: 2 5841-2 602 4 bp Feature: domain Description: HA Location: 26123-26228 bp Feature: domain Description: HA Location: 2 612 3-2 62 2 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT carB (PRK12815), aspS (PRK00476), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), KOG1803 (KOG1803, DNA helicase ), MTES_1575 (pfam18741), HA (pfam03457)