myRT

myRT report for GCA_001871675.1_ASM187167v1

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Seq: MNXN01000481.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_2965_c, whole genome shotgun sequence (16542 bp)
Overview 1 RT 1: 11426-16192 bp Neighborhood of RT #1 [11426, 16215] Yop-YscD_cpl ClpA ClpA RVT-DGRs Avd_like Feature: gene Location: 11426-11734 bp Feature: domain Description: Yop-YscD_cpl Location: 11459-11720 bp Feature: domain Description: Yop-YscD_cpl Location: 1 1 459-1 1 720 bp Feature: gene Location: 11805-14117 bp Feature: domain Description: ClpA Location: 11829-13053 bp Feature: domain Description: ClpA Location: 1 1 829-1 3053 bp Feature: domain Description: ClpA Location: 13092-14088 bp Feature: domain Description: ClpA Location: 1 3092-1 4088 bp Feature: gene Location: 14723-15793 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14930-15575 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 4930-1 5575 bp Feature: gene Location: 15856-16215 bp Feature: domain Description: Avd_like Location: 15889-16192 bp Feature: domain Description: Avd_like Location: 1 5889-1 61 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Yop-YscD_cpl (pfam16697), ClpA (TIGR02639), RVT-DGRs, Avd_like (cd16376)

Seq: MNXN01000468.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_2560_c, whole genome shotgun sequence (28264 bp)
Overview 1 RT 1: 19014-26349 bp Neighborhood of RT #1 [19014, 26423] Peptidase_C14 YfmG Hrd RVT-DGRs DUF4091 COG2865 Feature: gene Location: 19014-20414 bp Feature: domain Description: Peptidase_C14 Location: 19134-19599 bp Feature: domain Description: Peptidase_C14 Location: 19134-19599 bp Feature: domain Description: YfmG Location: 19896-20367 bp Feature: domain Description: YfmG Location: 19896-2 0367 bp Feature: gene Location: 20849-21328 bp Feature: domain Description: Hrd Location: 21086-21293 bp Feature: domain Description: Hrd Location: 2 1086-2 12 93 bp Feature: gene Location: 21389-21748 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21392-21542 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 1392 -2 1542 bp Feature: gene Location: 22547-25036 bp Feature: domain Description: DUF4091 Location: 24572-24782 bp Feature: domain Description: DUF4091 Location: 2 4572 -2 4782 bp Feature: gene Location: 25257-26423 bp Feature: domain Description: COG2865 Location: 25287-26349 bp Feature: domain Description: COG2 865 Location: 2 52 87-2 6349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs, DUF4091 (pfam13320), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: MNXN01000527.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_2824_c, whole genome shotgun sequence (17073 bp)
Overview 1 RT 1: 75-3638 bp Neighborhood of RT #1 [75, 3661] RVT-DGRs RVT-DGRs Avd_like YegI YfmG Feature: gene Location: 75-851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 285-405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 285-405 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 498-600 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 498-600 bp Feature: gene Location: 941-1318 bp Feature: domain Description: Avd_like Location: 971-1274 bp Feature: domain Description: Avd_like Location: 971-1274 bp Feature: gene Location: 1478-3661 bp Feature: domain Description: YegI Location: 1529-2489 bp Feature: domain Description: YegI Location: 1529-2489 bp Feature: domain Description: YfmG Location: 2906-3638 bp Feature: domain Description: YfmG Location: 2906-3 63 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YegI (COG4248), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)

Seq: MNXN01000102.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_37633_c, whole genome shotgun sequence (4009 bp)
Overview 1 RT 1: 1-3785 bp Neighborhood of RT #1 [1, 4000] Peptidase_C14 YfmG RVT-DGRs RVT-DGRs Feature: gene Location: 1-1225 bp Feature: domain Description: Peptidase_C14 Location: 142-880 bp Feature: domain Description: Peptidase_C14 Location: 14 2-880 bp Feature: domain Description: YfmG Location: 934-1222 bp Feature: domain Description: YfmG Location: 934 -1222 bp Feature: gene Location: 1295-2434 bp Feature: gene Location: 2939-4000 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3050-3170 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3050-3170 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3269-3785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3269-3785 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_C14 (pfam00656), YfmG (COG1262), RVT-DGRs

Seq: MNXN01000467.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_40361_c, whole genome shotgun sequence (5995 bp)
Overview 1 RT 1: 321-5705 bp Neighborhood of RT #1 [321, 5705] COG3018 Y1_Tnp RVT-DGRs RVT-DGRs Feature: gene Location: 321-1331 bp Feature: domain Description: COG3018 Location: 516-798 bp Feature: domain Description: COG3018 Location: 5 16-798 bp Feature: gene Location: 1804-2232 bp Feature: domain Description: Y1_Tnp Location: 1828-2167 bp Feature: domain Description: Y1_Tnp Location: 1828-2167 bp Feature: gene Location: 2583-3440 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2808-2931 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2808-2931 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3063-3198 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3063-3198 bp Feature: gene Location: 3946-5400 bp Feature: gene Location: 5397-5705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT-DGRs, COG3018 (Uncharacterized protein )

Seq: MNXN01000212.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_3634_c, whole genome shotgun sequence (14826 bp)
Overview 1 RT 1: 375-3317 bp Neighborhood of RT #1 [375, 3628] Avd_like RVT-DGRs RVT-DGRs HEPN NT_KNTase_like Feature: gene Location: 375-740 bp Feature: domain Description: Avd_like Location: 381-660 bp Feature: domain Description: Avd_like Location: 381-6 6 0 bp Feature: gene Location: 1420-2601 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1630-1753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 16 30-1753 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1852-2368 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1852-236 8 bp Feature: gene Location: 2580-3119 bp Feature: domain Description: HEPN Location: 2601-2994 bp Feature: domain Description: HEPN Location: 26 01-2994 bp Feature: gene Location: 3116-3628 bp Feature: domain Description: NT_KNTase_like Location: 3167-3317 bp Feature: domain Description: NT_KNTase_like Location: 316 7-3317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HEPN (smart00748), NT_KNTase_like (cd05403), Avd_like (cd16376)

Seq: MNXN01000111.1 Armatimonadetes bacterium CG2_30_66_41 cg2_3.0_scaffold_25669_c, whole genome shotgun sequence (4169 bp)
Overview 1 RT 1: 2305-3982 bp Neighborhood of RT #1 [2305, 4161] RVT-DGRs RT_Bac_retron_I Feature: gene Location: 2305-2679 bp Feature: gene Location: 2676-3104 bp Feature: gene Location: 3175-4161 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3193-3598 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3193-3598 bp Feature: domain Description: RT_Bac_retron_I Location: 3673-3982 bp Feature: domain Description: RT_Bac_retron_I Location: 367 3-3982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, RT_Bac_retron_I (cd01646)