myRT

myRT report for GCA_001871795.1_ASM187179v1

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Seq: MNXI01000142.1 Actinobacteria bacterium CG2_30_50_142 cg2_3.0_scaffold_2040_c, whole genome shotgun sequence (23065 bp)
Overview 1 RT 1: 1183-4358 bp Neighborhood of RT #1 [1183, 4972] RVT-GII GIIM PRK09183 COG4584 Feature: gene Location: 1183-2592 bp Ori: OIO83548.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534-2149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 534-21 49 bp Feature: domain Description: GIIM Note: maturase Location: 2203-2419 bp Feature: domain Description: GIIM Note: maturase Location: 2203-241 9 bp Feature: gene Location: 2764-3486 bp Ori: OIO83549.1 Feature: domain Description: PRK09183 Location: 2830-3472 bp Feature: domain Description: PRK091 83 Location: 2830-3472 bp Feature: gene Location: 3488-4972 bp Ori: OIO83550.1 Feature: domain Description: COG4584 Location: 3491-4358 bp Feature: domain Description: COG4584 Location: 3491 -4358 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )

Seq: MNXI01000002.1 Actinobacteria bacterium CG2_30_50_142 cg2_3.0_scaffold_14741_c, whole genome shotgun sequence (6796 bp)
Overview 1 RT 1: 548-5727 bp Neighborhood of RT #1 [548, 5738] CRISPR_Cas2 cas1_CYANO RVT-CRISPR cas4 Cas1_I-II-III CRISPR_Cas6 Feature: gene Location: 548-820 bp Ori: OIO88992.1 Feature: domain Description: CRISPR_Cas2 Location: 551-764 bp Feature: domain Description: CRISPR_Cas2 Location: 551-764 bp Feature: gene Location: 826-1818 bp Ori: OIO88993.1 Feature: domain Description: cas1_CYANO Location: 835-1813 bp Feature: domain Description: cas1_CYANO Location: 835-1813 bp Feature: gene Location: 1879-3579 bp Ori: OIO88994.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2110-2713 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 2 110-2 713 bp Feature: domain Description: cas4 Location: 2983-3517 bp Feature: domain Description: cas4 Location: 2 983-3517 bp Feature: gene Location: 3756-4763 bp Ori: OIO88995.1 Feature: domain Description: Cas1_I-II-III Location: 3768-4725 bp Feature: domain Description: Cas1_I-II-III Location: 3768-472 5 bp Feature: gene Location: 4785-5738 bp Ori: OIO88996.1 Feature: domain Description: CRISPR_Cas6 Location: 5361-5727 bp Feature: domain Description: CRISPR_Cas6 Location: 5361-572 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas2 (pfam09827), cas1_CYANO (TIGR04093), RVT-CRISPR, cas4 (TIGR00372), Cas1_I-II-III (cl00656), CRISPR_Cas6 (pfam10040)