myRT

myRT report for GCA_001873925.1_ASM187392v1

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Seq: MNYG01000366.1 Deltaproteobacteria bacterium CG2_30_63_29 cg2_3.0_scaffold_4988_c, whole genome shotgun sequence (12500 bp)
Overview 1 RT 1: 1-6237 bp Neighborhood of RT #1 [1, 6242] RVT-DGRs HRDC YfmG Feature: gene Location: 1-356 bp Feature: gene Location: 1477-2586 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1774-2380 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 774-2380 bp Feature: gene Location: 2583-3338 bp Feature: domain Description: HRDC Location: 2859-3048 bp Feature: domain Description: HRDC Location: 2859-3048 bp Feature: gene Location: 3597-6242 bp Feature: domain Description: YfmG Location: 5469-6237 bp Feature: domain Description: YfmG Location: 5469-6237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HRDC (smart00341), YfmG (COG1262)

Seq: MNYG01000250.1 Deltaproteobacteria bacterium CG2_30_63_29 cg2_3.0_scaffold_7632_c, whole genome shotgun sequence (14268 bp)
Overview 1 RT 1: 5293-12686 bp Neighborhood of RT #1 [5293, 12925] LNS2 HEAT_2 HEAT_2 Aldo_ket_red RVT-Retrons YfmG SDR_a5 Feature: gene Location: 5293-6567 bp Feature: domain Description: LNS2 Location: 6028-6463 bp Feature: domain Description: LNS2 Location: 602 8-6463 bp Feature: gene Location: 6818-8839 bp Feature: domain Description: HEAT_2 Location: 7127-7379 bp Feature: domain Description: HEAT_2 Location: 712 7-7379 bp Feature: domain Description: HEAT_2 Location: 7505-7745 bp Feature: domain Description: HEAT_2 Location: 7505-7745 bp Feature: domain Description: Aldo_ket_red Location: 8219-8780 bp Feature: domain Description: Aldo_ket_red Location: 82 19-8780 bp Feature: gene Location: 9295-10716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9853-10477 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9853-10477 bp Feature: gene Location: 10709-11596 bp Feature: domain Description: YfmG Location: 10940-11585 bp Feature: domain Description: YfmG Location: 10940-11585 bp Feature: gene Location: 12056-12925 bp Feature: domain Description: SDR_a5 Location: 12071-12686 bp Feature: domain Description: SDR_a5 Location: 12 071-12 686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), LNS2 (smart00775), HEAT_2 (pfam13646), Aldo_ket_red (pfam00248), RVT-Retrons

Seq: MNYG01000017.1 Deltaproteobacteria bacterium CG2_30_63_29 cg2_3.0_scaffold_4960_c, whole genome shotgun sequence (18842 bp)
Overview 1 RT 1: 3415-13980 bp Neighborhood of RT #1 [3415, 13997] RVT-Retrons WD40 WD40 HEAT_2 PRK13800 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 3415-3651 bp Feature: gene Location: 3735-5027 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4188-4812 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4188-4812 bp Feature: gene Location: 5307-7178 bp Feature: gene Location: 7446-13997 bp Feature: domain Description: WD40 Location: 7974-8052 bp Feature: domain Description: WD40 Location: 7974-8052 bp Feature: domain Description: WD40 Location: 8103-8193 bp Feature: domain Description: WD40 Location: 8103 -8193 bp Feature: domain Description: HEAT_2 Location: 8406-8595 bp Feature: domain Description: HEAT_2 Location: 8406-8595 bp Feature: domain Description: PRK13800 Location: 8694-9036 bp Feature: domain Description: PRK13 800 Location: 8694-903 6 bp Feature: domain Description: HEAT_2 Location: 9360-9603 bp Feature: domain Description: HEAT_2 Location: 93 60-9603 bp Feature: domain Description: HEAT_2 Location: 9915-10128 bp Feature: domain Description: HEAT_2 Location: 9915-10128 bp Feature: domain Description: HEAT_2 Location: 10164-10356 bp Feature: domain Description: HEAT_2 Location: 10164-103 56 bp Feature: domain Description: HEAT_2 Location: 10410-10608 bp Feature: domain Description: HEAT_2 Location: 10410-10608 bp Feature: domain Description: HEAT_2 Location: 11421-11508 bp Feature: domain Description: HEAT_2 Location: 11421-11508 bp Feature: domain Description: HEAT_2 Location: 11706-11946 bp Feature: domain Description: HEAT_2 Location: 11706-11946 bp Feature: domain Description: HEAT_2 Location: 12345-12609 bp Feature: domain Description: HEAT_2 Location: 123 45-12609 bp Feature: domain Description: HEAT_2 Location: 12846-12999 bp Feature: domain Description: HEAT_2 Location: 12846-12999 bp Feature: domain Description: HEAT_2 Location: 13494-13677 bp Feature: domain Description: HEAT_2 Location: 13 494-13 677 bp Feature: domain Description: HEAT_2 Location: 13839-13980 bp Feature: domain Description: HEAT_2 Location: 13 83 9-13 980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WD40 (smart00320), HEAT_2 (pfam13646), PRK13800 (fumarate reductase/succinate dehydrogenase flavoprotein subunit)