myRT

myRT report for GCA_001874725.1_ASM187472v1

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Seq: MPCJ01000002.1 Klebsiella pneumoniae strain AR_0012 scaffold00002, whole genome shotgun sequence (4805623 bp)
Overview 1 RT 1: 205711-211316 bp 2 RT 2: 548213-553631 bp 3 RT 3: 725829-733604 bp 4 RT 4: 1963026-1969509 bp 5 RT 5: 2068434-2073428 bp Neighborhood of RT #1 [205711, 211342] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [548213, 553633] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [725829, 733606] Rve PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #4 [1963026, 1969511] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [2068434, 2073430] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 205711-206274 bp Feature: domain Description: YbjK Location: 205717-206254 bp Feature: domain Description: YbjK Location: 20571 7-206254 bp Feature: gene Location: 206397-207449 bp Feature: domain Description: int Location: 206400-207399 bp Feature: domain Description: int Location: 206400-207399 bp Feature: gene Location: 207865-209352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208270-208960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208270-208960 bp Feature: gene Location: 209451-210395 bp Feature: gene Location: 210407-211342 bp Feature: domain Description: Phage_CI_repr Location: 210491-210674 bp Feature: domain Description: Phage_CI_repr Location: 21 0491 -21 0674 bp Feature: domain Description: Phage_CI_repr Location: 210803-210995 bp Feature: domain Description: Phage_CI_repr Location: 21 0803-21 0995 bp Feature: domain Description: Phage_CI_C Location: 211022-211316 bp Feature: domain Description: Phage_CI_C Location: 21 1 022-21 1 31 6 bp Feature: gene Location: 548213-549352 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 548396-549296 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 548396-549296 bp Feature: gene Location: 549523-549765 bp Feature: domain Description: DinI Location: 549574-549754 bp Feature: domain Description: DinI Location: 549574-549754 bp Feature: gene Location: 550380-551867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550785-551475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 550785-551 475 bp Feature: gene Location: 551946-552365 bp Feature: domain Description: PRK10276 Location: 551949-552360 bp Feature: domain Description: PRK1 0276 Location: 551 949-552360 bp Feature: gene Location: 552368-553633 bp Feature: domain Description: umuC Location: 552371-553631 bp Feature: domain Description: umuC Location: 552371 -553631 bp Feature: gene Location: 725829-726533 bp Feature: domain Description: Rve Location: 725832-726477 bp Feature: domain Description: Rve Location: 725832-726477 bp Feature: gene Location: 726599-727048 bp Feature: domain Description: PinE Location: 726608-727040 bp Feature: domain Description: PinE Location: 726608-727040 bp Feature: gene Location: 728443-729930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728848-729538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 728848-729538 bp Feature: gene Location: 730353-731840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730758-731448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730758-731 448 bp Feature: gene Location: 731833-732339 bp Feature: domain Description: PRK10276 Location: 731923-732334 bp Feature: domain Description: PRK1 0276 Location: 731 923-732334 bp Feature: gene Location: 732341-733606 bp Feature: domain Description: umuC Location: 732344-733604 bp Feature: domain Description: umuC Location: 732344-733604 bp Feature: gene Location: 1963026-1964084 bp Feature: domain Description: YccC Location: 1963032-1964070 bp Feature: domain Description: YccC Location: 1 963032-1 964070 bp Feature: gene Location: 1964183-1964656 bp Feature: domain Description: PRK10016 Location: 1964186-1964645 bp Feature: domain Description: PRK1 001 6 Location: 1 9641 86-1 964645 bp Feature: gene Location: 1964738-1966225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965143-1965833 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9651 43-1 965833 bp Feature: gene Location: 1966743-1967906 bp Feature: domain Description: dacD Location: 1966746-1967901 bp Feature: domain Description: dacD Location: 1 966746-1 967901 bp Feature: gene Location: 1968087-1969511 bp Feature: domain Description: SbcB Location: 1968093-1969509 bp Feature: domain Description: SbcB Location: 1 968093-1 969509 bp Feature: gene Location: 2068434-2069705 bp Feature: domain Description: umuC Location: 2068437-2069700 bp Feature: domain Description: umuC Location: 2068437-2069700 bp Feature: gene Location: 2069705-2070130 bp Feature: domain Description: PRK10276 Location: 2069708-2070116 bp Feature: domain Description: PRK1 0276 Location: 2069708-20701 1 6 bp Feature: gene Location: 2070533-2072020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2070938-2071628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2070938-2071 628 bp Feature: gene Location: 2072254-2072484 bp Feature: gene Location: 2073005-2073430 bp Feature: domain Description: Antirestrict Location: 2073140-2073428 bp Feature: domain Description: Antirestrict Location: 20731 40-2073428 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Antirestrict (pfam03230)

Seq: MPCJ01000008.1 Klebsiella pneumoniae strain AR_0012 scaffold00008, whole genome shotgun sequence (5733 bp)
Overview 1 RT 1: 1-3247 bp Neighborhood of RT #1 [1, 3249] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 1-76 bp Feature: domain Description: umuC Location: 4-76 bp Feature: domain Description: umuC Location: 4-76 bp Feature: gene Location: 76-507 bp Feature: domain Description: PRK10276 Location: 127-490 bp Feature: domain Description: PRK102 76 Location: 12 7-490 bp Feature: gene Location: 913-2400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-2008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1318-2 008 bp Feature: gene Location: 2552-2827 bp Feature: domain Description: InsA Location: 2558-2819 bp Feature: domain Description: InsA Location: 2 558-2 819 bp Feature: gene Location: 2872-3249 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2875-3247 bp Feature: domain Description: DDE_Tnp_IS1 Location: 2 875-32 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: MPCJ01000001.1 Klebsiella pneumoniae strain AR_0012 scaffold00001, whole genome shotgun sequence (821923 bp)
Overview 1 RT 1: 582153-585560 bp Neighborhood of RT #1 [582153, 585661] Laminin_G_3 RVT-GII PRK10276 PRK10276 Feature: gene Location: 582153-582884 bp Feature: domain Description: Laminin_G_3 Location: 582474-582828 bp Feature: domain Description: Laminin_G_3 Location: 582474-582828 bp Feature: gene Location: 582881-583090 bp Feature: gene Location: 583540-585027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583945-584635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583 945-58463 5 bp Feature: gene Location: 585105-585344 bp Feature: gene Location: 585344-585661 bp Feature: domain Description: PRK10276 Location: 585350-585464 bp Feature: domain Description: PRK10276 Location: 5853 50-585464 bp Feature: domain Description: PRK10276 Location: 585491-585560 bp Feature: domain Description: PRK10276 Location: 585491-585560 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)