myRT

myRT report for GCA_001874845.1_ASM187484v1

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Seq: MPCO01000001.1 Escherichia coli strain AR_0048 scaffold00001, whole genome shotgun sequence (4952051 bp)
Overview 1 RT 1: 1251531-1257185 bp 2 RT 2: 4064237-4070583 bp 3 RT 3: 4614768-4620087 bp Neighborhood of RT #1 [1251531, 1257187] YcgN hlyE RVT-GII PRK10276 umuC Neighborhood of RT #2 [4064237, 4070588] PRK08178 PRK08155 RVT-GII PRK14754 emrD Neighborhood of RT #3 [4614768, 4620113] YesM RVT-GII GIIM RVT-GII PFLE_PFLC Feature: gene Location: 1251531-1252100 bp Ori: OKL95093.1 Feature: domain Description: YcgN Location: 1251645-1252095 bp Feature: domain Description: YcgN Location: 1 251 645-1 252095 bp Feature: gene Location: 1252307-1253218 bp Ori: OKL95094.1 Feature: domain Description: hlyE Location: 1252310-1253216 bp Feature: domain Description: hlyE Location: 1 25231 0-1 25321 6 bp Feature: gene Location: 1253934-1255421 bp Ori: OKL95095.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254339-1255029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 254339-1 255029 bp Feature: gene Location: 1255500-1255919 bp Ori: OKL95096.1 Feature: domain Description: PRK10276 Location: 1255503-1255917 bp Feature: domain Description: PRK1 0276 Location: 1 255503-1 25591 7 bp Feature: gene Location: 1255919-1257187 bp Ori: OKL95097.1 Feature: domain Description: umuC Location: 1255922-1257185 bp Feature: domain Description: umuC Location: 1 255922-1 2571 85 bp Feature: gene Location: 4064237-4064527 bp Ori: OKL97738.1 Feature: domain Description: PRK08178 Location: 4064240-4064525 bp Feature: domain Description: PRK081 78 Location: 4064240-4064525 bp Feature: gene Location: 4064531-4066219 bp Ori: OKL97739.1 Feature: domain Description: PRK08155 Location: 4064534-4066217 bp Feature: domain Description: PRK081 55 Location: 4064534-406621 7 bp Feature: gene Location: 4066792-4068279 bp Ori: OKL97740.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4067197-4067887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40671 97-4067887 bp Feature: gene Location: 4068896-4068985 bp Ori: OKL97741.1 Feature: domain Description: PRK14754 Location: 4068899-4068983 bp Feature: domain Description: PRK1 4754 Location: 4068899-4068983 bp Feature: gene Location: 4069404-4070588 bp Ori: OKL97742.1 Feature: domain Description: emrD Location: 4069407-4070583 bp Feature: domain Description: emrD Location: 4069407-4070583 bp Feature: gene Location: 4614768-4615997 bp Ori: OKL98234.1 Feature: domain Description: YesM Location: 4615248-4615989 bp Feature: domain Description: YesM Location: 461 5248-461 5989 bp Feature: gene Location: 4616070-4616258 bp Feature: gene Location: 4616580-4617062 bp Ori: OKL98236.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4616589-4616829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 6589-461 6829 bp Feature: domain Description: GIIM Note: maturase Location: 4616877-4617057 bp Feature: domain Description: GIIM Note: maturase Location: 461 6877-461 7057 bp Feature: gene Location: 4617129-4617668 bp Ori: OKL98237.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4617459-4617537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 461 7459-461 7537 bp Feature: gene Location: 4618154-4619059 bp Feature: gene Location: 4619196-4620113 bp Ori: OKL98239.1 Feature: domain Description: PFLE_PFLC Location: 4619232-4620087 bp Feature: domain Description: PFLE_PFLC Location: 461 9232-4620087 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YcgN (COG2983), hlyE (PRK11376), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PRK08178 (acetolactate synthase 1 small subunit), PRK08155 (acetolactate synthase large subunit), PRK14754 (toxic peptide TisB; Provisional), emrD (PRK11652), YesM (COG2972)
GIIM (pfam08388), PFLE_PFLC (TIGR02494)

Seq: MPCO01000009.1 Escherichia coli strain AR_0048 scaffold00009, whole genome shotgun sequence (118284 bp)
Overview 1 RT 1: 74201-78580 bp Neighborhood of RT #1 [74201, 78580] PinE PRK15442 RVT-GII ParE_toxin Feature: gene Location: 74201-74758 bp Ori: OKL91259.1 Feature: domain Description: PinE Location: 74204-74750 bp Feature: domain Description: PinE Location: 742 04-74750 bp Feature: gene Location: 74941-75801 bp Ori: OKL91260.1 Feature: domain Description: PRK15442 Location: 74950-75799 bp Feature: domain Description: PRK15442 Location: 74950-75799 bp Feature: gene Location: 76418-77833 bp Ori: OKL91261.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76703-77390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 76703-77390 bp Feature: gene Location: 78084-78287 bp Ori: OKL91262.1 Feature: domain Description: ParE_toxin Location: 78099-78282 bp Feature: domain Description: ParE_toxin Location: 78099-782 82 bp Feature: gene Location: 78413-78580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), PRK15442 (beta-lactamase TEM; Provisional), RVT-GII, ParE_toxin (pfam05016)