myRT

myRT report for GCA_001875025.1_ASM187502v1

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Seq: MPCN01000001.1 Klebsiella pneumoniae strain AR_0003 scaffold00001, whole genome shotgun sequence (4469872 bp)
Overview 1 RT 1: 572604-576011 bp 2 RT 2: 1013951-1019556 bp 3 RT 3: 1356452-1361870 bp 4 RT 4: 2844131-2850614 bp Neighborhood of RT #1 [572604, 576112] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1013951, 1019582] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1356452, 1361872] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2844131, 2850616] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 572604-573335 bp Feature: domain Description: Laminin_G_3 Location: 572925-573279 bp Feature: domain Description: Laminin_G_3 Location: 572925-573279 bp Feature: gene Location: 573332-573541 bp Feature: gene Location: 573991-575478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574396-575086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 574396-575086 bp Feature: gene Location: 575556-575795 bp Feature: gene Location: 575795-576112 bp Feature: domain Description: PRK10276 Location: 575801-575915 bp Feature: domain Description: PRK1 0276 Location: 575801 -57591 5 bp Feature: domain Description: PRK10276 Location: 575942-576011 bp Feature: domain Description: PRK1 0276 Location: 575942-57601 1 bp Feature: gene Location: 1013951-1014514 bp Feature: domain Description: YbjK Location: 1013957-1014494 bp Feature: domain Description: YbjK Location: 1 01 3957-1 01 4494 bp Feature: gene Location: 1014637-1015689 bp Feature: domain Description: int Location: 1014640-1015639 bp Feature: domain Description: int Location: 1 01 4640-1 01 5639 bp Feature: gene Location: 1016105-1017592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1016510-1017200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 651 0-1 01 7200 bp Feature: gene Location: 1017691-1018635 bp Feature: gene Location: 1018647-1019582 bp Feature: domain Description: Phage_CI_repr Location: 1018731-1018914 bp Feature: domain Description: Phage_CI_repr Location: 1 01 8731 -1 01 891 4 bp Feature: domain Description: Phage_CI_repr Location: 1019043-1019235 bp Feature: domain Description: Phage_CI_repr Location: 1 01 9043-1 01 9235 bp Feature: domain Description: Phage_CI_C Location: 1019262-1019556 bp Feature: domain Description: Phage_CI_C Location: 1 01 9262-1 01 9556 bp Feature: gene Location: 1356452-1357591 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1356635-1357535 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 356635-1 357535 bp Feature: gene Location: 1357762-1358004 bp Feature: domain Description: DinI Location: 1357813-1357993 bp Feature: domain Description: DinI Location: 1 35781 3-1 357993 bp Feature: gene Location: 1358619-1360106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1359024-1359714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 359024-1 35971 4 bp Feature: gene Location: 1360185-1360604 bp Feature: domain Description: PRK10276 Location: 1360188-1360599 bp Feature: domain Description: PRK1 0276 Location: 1 3601 88-1 360599 bp Feature: gene Location: 1360607-1361872 bp Feature: domain Description: umuC Location: 1360610-1361870 bp Feature: domain Description: umuC Location: 1 36061 0-1 361 870 bp Feature: gene Location: 2844131-2845189 bp Feature: domain Description: YccC Location: 2844137-2845175 bp Feature: domain Description: YccC Location: 28441 37-28451 75 bp Feature: gene Location: 2845288-2845761 bp Feature: domain Description: PRK10016 Location: 2845291-2845750 bp Feature: domain Description: PRK1 001 6 Location: 2845291 -2845750 bp Feature: gene Location: 2845843-2847330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2846248-2846938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2846248-2846938 bp Feature: gene Location: 2847848-2849011 bp Feature: domain Description: dacD Location: 2847851-2849006 bp Feature: domain Description: dacD Location: 2847851 -2849006 bp Feature: gene Location: 2849192-2850616 bp Feature: domain Description: SbcB Location: 2849198-2850614 bp Feature: domain Description: SbcB Location: 28491 98-285061 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)