myRT

myRT report for GCA_001875045.2_ASM187504v2

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Seq: MPCM02000007.1 Klebsiella pneumoniae strain AR_0004 scaffold00007, whole genome shotgun sequence (111295 bp)
Overview 1 RT 1: 87654-91703 bp Neighborhood of RT #1 [87654, 91703] umuC PRK10276 RVT-GII Feature: gene Location: 87654-88925 bp Ori: OVA21204.1 Feature: domain Description: umuC Location: 87657-88920 bp Feature: domain Description: umuC Location: 87657-88920 bp Feature: gene Location: 88925-89350 bp Ori: OVA21205.1 Feature: domain Description: PRK10276 Location: 88928-89336 bp Feature: domain Description: PRK1 0276 Location: 88928-89336 bp Feature: gene Location: 89756-90352 bp Ori: OVA21206.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90158-90284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 58-90284 bp Feature: gene Location: 90544-90960 bp Feature: gene Location: 91473-91703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: MPCM02000001.1 Klebsiella pneumoniae strain AR_0004 scaffold00001, whole genome shotgun sequence (3232614 bp)
Overview 1 RT 1: 582140-585546 bp 2 RT 2: 1023470-1029075 bp 3 RT 3: 1365958-1371376 bp 4 RT 4: 2726167-2732650 bp Neighborhood of RT #1 [582140, 585647] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1023470, 1029101] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1365958, 1371378] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2726167, 2732652] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 582140-582871 bp Ori: OVA23981.1 Feature: domain Description: Laminin_G_3 Location: 582461-582815 bp Feature: domain Description: Laminin_G_3 Location: 582 461-582 815 bp Feature: gene Location: 582868-583077 bp Feature: gene Location: 583530-585014 bp Ori: OVA23983.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583932-584622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583932 -58462 2 bp Feature: gene Location: 585091-585330 bp Feature: gene Location: 585330-585647 bp Ori: OVA23985.1 Feature: domain Description: PRK10276 Location: 585336-585450 bp Feature: domain Description: PRK102 76 Location: 585336-585450 bp Feature: domain Description: PRK10276 Location: 585477-585546 bp Feature: domain Description: PRK102 76 Location: 585477-585546 bp Feature: gene Location: 1023470-1024033 bp Ori: OVA24384.1 Feature: domain Description: YbjK Location: 1023476-1024013 bp Feature: domain Description: YbjK Location: 102 3476-102 4013 bp Feature: gene Location: 1024156-1025208 bp Ori: OVA24385.1 Feature: domain Description: int Location: 1024159-1025158 bp Feature: domain Description: int Location: 102 4159-102 5158 bp Feature: gene Location: 1025627-1027111 bp Ori: OVA24386.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026029-1026719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 602 9-102 6719 bp Feature: gene Location: 1027210-1028154 bp Feature: gene Location: 1028166-1029101 bp Ori: OVA24388.1 Feature: domain Description: Phage_CI_repr Location: 1028250-1028433 bp Feature: domain Description: Phage_CI_repr Location: 102 82 50-102 8433 bp Feature: domain Description: Phage_CI_repr Location: 1028562-1028754 bp Feature: domain Description: Phage_CI_repr Location: 102 8562 -102 8754 bp Feature: domain Description: Phage_CI_C Location: 1028781-1029075 bp Feature: domain Description: Phage_CI_C Location: 102 8781-102 9075 bp Feature: gene Location: 1365958-1367097 bp Ori: OVA24714.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1366141-1367041 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1366141-1367041 bp Feature: gene Location: 1367268-1367510 bp Ori: OVA24715.1 Feature: domain Description: DinI Location: 1367319-1367499 bp Feature: domain Description: DinI Location: 1367319-1367499 bp Feature: gene Location: 1368128-1369612 bp Ori: OVA24716.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368530-1369220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1368530-13692 2 0 bp Feature: gene Location: 1369691-1370110 bp Ori: OVA24717.1 Feature: domain Description: PRK10276 Location: 1369694-1370105 bp Feature: domain Description: PRK102 76 Location: 1369694-1370105 bp Feature: gene Location: 1370113-1371378 bp Ori: OVA24718.1 Feature: domain Description: umuC Location: 1370116-1371376 bp Feature: domain Description: umuC Location: 1370116-1371376 bp Feature: gene Location: 2726167-2727225 bp Ori: OVA26056.1 Feature: domain Description: YccC Location: 2726173-2727211 bp Feature: domain Description: YccC Location: 2 72 6173-2 72 72 11 bp Feature: gene Location: 2727324-2727797 bp Ori: OVA26057.1 Feature: domain Description: PRK10016 Location: 2727327-2727786 bp Feature: domain Description: PRK10016 Location: 2 72 732 7-2 72 7786 bp Feature: gene Location: 2727879-2729363 bp Ori: OVA26058.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2728281-2728971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 72 82 81-2 72 8971 bp Feature: gene Location: 2729884-2731047 bp Ori: OVA26059.1 Feature: domain Description: dacD Location: 2729887-2731042 bp Feature: domain Description: dacD Location: 2 72 9887-2 731042 bp Feature: gene Location: 2731228-2732652 bp Ori: OVA26060.1 Feature: domain Description: SbcB Location: 2731234-2732650 bp Feature: domain Description: SbcB Location: 2 7312 34-2 732 650 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)