myRT

myRT report for GCA_001875055.2_ASM187505v2

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Seq: MPCL02000001.1 Klebsiella pneumoniae strain AR_0005 scaffold00001, whole genome shotgun sequence (4425950 bp)
Overview 1 RT 1: 583349-586756 bp 2 RT 2: 1025892-1031497 bp 3 RT 3: 1368393-1373811 bp 4 RT 4: 1554221-1561996 bp 5 RT 5: 2797039-2803522 bp Neighborhood of RT #1 [583349, 586857] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025892, 1031523] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1368393, 1373813] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554221, 1561998] Rve PinE RVT-GII RVT-GII PRK10276 umuC Neighborhood of RT #5 [2797039, 2803524] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583349-584080 bp Feature: domain Description: Laminin_G_3 Location: 583670-584024 bp Feature: domain Description: Laminin_G_3 Location: 583670-584024 bp Feature: gene Location: 584077-584286 bp Feature: gene Location: 584736-586223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585141-585831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5851 41 -585831 bp Feature: gene Location: 586301-586540 bp Feature: gene Location: 586540-586857 bp Feature: domain Description: PRK10276 Location: 586546-586660 bp Feature: domain Description: PRK1 0276 Location: 586546-586660 bp Feature: domain Description: PRK10276 Location: 586687-586756 bp Feature: domain Description: PRK1 0276 Location: 586687-586756 bp Feature: gene Location: 1025892-1026455 bp Feature: domain Description: YbjK Location: 1025898-1026435 bp Feature: domain Description: YbjK Location: 1 025898-1 026435 bp Feature: gene Location: 1026578-1027630 bp Feature: domain Description: int Location: 1026581-1027580 bp Feature: domain Description: int Location: 1 026581 -1 027580 bp Feature: gene Location: 1028046-1029533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028451-1029141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028451 -1 0291 41 bp Feature: gene Location: 1029632-1030576 bp Feature: gene Location: 1030588-1031523 bp Feature: domain Description: Phage_CI_repr Location: 1030672-1030855 bp Feature: domain Description: Phage_CI_repr Location: 1 030672-1 030855 bp Feature: domain Description: Phage_CI_repr Location: 1030984-1031176 bp Feature: domain Description: Phage_CI_repr Location: 1 030984-1 031 1 76 bp Feature: domain Description: Phage_CI_C Location: 1031203-1031497 bp Feature: domain Description: Phage_CI_C Location: 1 031 203-1 031 497 bp Feature: gene Location: 1368393-1369532 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368576-1369476 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 368576-1 369476 bp Feature: gene Location: 1369703-1369945 bp Feature: domain Description: DinI Location: 1369754-1369934 bp Feature: domain Description: DinI Location: 1 369754-1 369934 bp Feature: gene Location: 1370560-1372047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370965-1371655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370965-1 371 655 bp Feature: gene Location: 1372126-1372545 bp Feature: domain Description: PRK10276 Location: 1372129-1372540 bp Feature: domain Description: PRK1 0276 Location: 1 3721 29-1 372540 bp Feature: gene Location: 1372548-1373813 bp Feature: domain Description: umuC Location: 1372551-1373811 bp Feature: domain Description: umuC Location: 1 372551 -1 37381 1 bp Feature: gene Location: 1554221-1554925 bp Feature: domain Description: Rve Location: 1554224-1554869 bp Feature: domain Description: Rve Location: 1 554224-1 554869 bp Feature: gene Location: 1554991-1555440 bp Feature: domain Description: PinE Location: 1555000-1555432 bp Feature: domain Description: PinE Location: 1 555000-1 555432 bp Feature: gene Location: 1556835-1558322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557240-1557930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557240-1 557930 bp Feature: gene Location: 1558745-1560232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1559150-1559840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5591 50-1 559840 bp Feature: gene Location: 1560225-1560731 bp Feature: domain Description: PRK10276 Location: 1560315-1560726 bp Feature: domain Description: PRK1 0276 Location: 1 56031 5-1 560726 bp Feature: gene Location: 1560733-1561998 bp Feature: domain Description: umuC Location: 1560736-1561996 bp Feature: domain Description: umuC Location: 1 560736-1 561 996 bp Feature: gene Location: 2797039-2798097 bp Feature: domain Description: YccC Location: 2797045-2798083 bp Feature: domain Description: YccC Location: 2797045-2798083 bp Feature: gene Location: 2798196-2798669 bp Feature: domain Description: PRK10016 Location: 2798199-2798658 bp Feature: domain Description: PRK1 001 6 Location: 27981 99-2798658 bp Feature: gene Location: 2798751-2800238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2799156-2799846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27991 56-2799846 bp Feature: gene Location: 2800756-2801919 bp Feature: domain Description: dacD Location: 2800759-2801914 bp Feature: domain Description: dacD Location: 2800759-2801 91 4 bp Feature: gene Location: 2802100-2803524 bp Feature: domain Description: SbcB Location: 2802106-2803522 bp Feature: domain Description: SbcB Location: 28021 06-2803522 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: MPCL02000004.1 Klebsiella pneumoniae strain AR_0005 scaffold00004, whole genome shotgun sequence (186050 bp)
Overview 1 RT 1: 128466-133460 bp Neighborhood of RT #1 [128466, 133462] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 128466-129737 bp Feature: domain Description: umuC Location: 128469-129732 bp Feature: domain Description: umuC Location: 12 8469-12 9732 bp Feature: gene Location: 129737-130162 bp Feature: domain Description: PRK10276 Location: 129740-130148 bp Feature: domain Description: PRK102 76 Location: 12 9740-130148 bp Feature: gene Location: 130565-132052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130970-131660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130970-131660 bp Feature: gene Location: 132286-132516 bp Feature: gene Location: 133037-133462 bp Feature: domain Description: Antirestrict Location: 133172-133460 bp Feature: domain Description: Antirestrict Location: 133172 -133460 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)